Marinobacterium iners: CFI10_15930
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Entry
CFI10_15930 CDS
T07136
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mgeo
Marinobacterium iners
Pathway
mgeo03030
DNA replication
mgeo03430
Mismatch repair
mgeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFI10_15930
03430 Mismatch repair
CFI10_15930
03440 Homologous recombination
CFI10_15930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgeo03032
]
CFI10_15930
03400 DNA repair and recombination proteins [BR:
mgeo03400
]
CFI10_15930
Enzymes [BR:
mgeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFI10_15930
DNA replication proteins [BR:
mgeo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFI10_15930
DNA repair and recombination proteins [BR:
mgeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFI10_15930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QSR36443
LinkDB
All DBs
Position
complement(3325037..3328534)
Genome browser
AA seq
1165 aa
AA seq
DB search
MSDPRFVHLRVHTEYSLFDGLVRIKPLVAAAAAQKMPAVAVTDQTNLFALIKFYKAALGA
GVKPICGVDLWVQNPIEPEGEPFRLTLLVRTGKGYRNLMELVSRAYAEGQNIDPERALVK
VEWIREKAEGLIALSGARQGEIGRALLSESGNAEAILDSWRKVFPDSFYLEVQRTGRSGD
EALVHASVELAARTGCPLVATNEVMFLKQDDFEAHEARVCINLGRTLDDPQRPHNYSDQQ
YFRSADEMAELFSDIPSALENTVEIARRCNIELELGTYYLPRYPVPEGMLMDDYFRQVSW
EGLEERLAFLLDKDAPDYQERRRPYEERLEFELDIIIQMGFPGYFLIVMDFIKWAKENGI
PVGPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDIDFCMDNRDKVID
YVARTYGRDAVSQIITYGTMAAKAVVRDVARVQGKPFGLADRLSKLIPFEVGMTLNKAWE
QEETLRDFVNGSEEAQEIMEMAYKLEGVTRNVGKHAGGVVIAPTKLTDFSATYCDEYGQG
LVTQFDKNDVEEAGLVKFDFLGLRTLTIIDWALDTINRKRRKTGEAALEIETIDLEDPDT
FKLLQSAQTTAVFQLESSGMKDLIRRLLPNRFEDIIALVALFRPGPLQSGMVDDFINRKH
GRAPLAWPHPDYQLDSLQPVLEPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKK
PEEMAKQRSIFLEGCANQGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKQ
HYPAAFMAAVLSSDMQNTDKVVIFIEECRQMKLTVRLPDVNDSEYMFTVNDADEVVYGLG
AVKGVGEGPVEAIVRARQEGGAFRDLFDFCERVGAGKLNKRVLEALVRCGALDSVGPSRA
VLWDAIPAALKAADQSARNEDAGMMDLFGAVEAEAPSDPYAEFHKARDWTDKERLQGEKD
TLGLYVTGHPIDEYEAELKHLVSRKLVEIQPDRGRSQKMAGLVVDMRLKKTKKGDNLCFL
TLDDRSARLEVTLFGDTYEEARTVINKDAVLVVEGEVVQDDYNGGLKVRCNRVQSMAQIR
AAQARCVEVQCDTRQLGPRQLRQLADTLAKGRSPLISLSVALRYRREDAEARVWLGSEWS
VSPTDELLLQLKEQFGNKAVRLCYD
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatccacgctttgtccatcttcgggtacataccgaatattcactgttcgacggt
ctggtcagaatcaaaccgttagtggccgccgcagcggcgcagaaaatgccggccgttgct
gtcactgatcagaccaacctgtttgccttaatcaaattctacaaggcggcattgggcgct
ggcgtcaaaccgatctgcggtgttgatctatgggtacaaaacccgattgagcccgagggt
gagccctttcggctgaccctgctggtacgtacaggcaagggttatcgcaacttgatggag
ctggtatcccgcgcctatgccgaagggcagaatattgaccctgagcgtgcgctggtcaag
gtggagtggatacgggaaaaggctgaaggcctgattgccctgtccggtgcgcgtcagggc
gagataggccgggcgctgctatccgaaagcggcaatgccgaagcaatcctcgacagctgg
cgtaaggtctttccggacagtttttaccttgaagttcagcgtaccggacgctcaggtgat
gaggcgctggtgcatgccagtgttgaactggcggcaagaacgggctgcccgctggtggcc
accaatgaagtgatgttccttaagcaggatgactttgaggcccatgaggctcgggtgtgt
atcaacctgggtcgcactttggatgatccgcaacgaccgcacaattactccgatcaacaa
tacttccgttccgctgatgagatggccgagttgttcagtgacattcccagtgcactggaa
aacacggtcgagatcgctcggcgctgcaacatcgagctggaactgggaacgtactacctg
ccgcgctaccccgtgccggaagggatgttgatggatgactacttccgtcaggtgtcttgg
gaaggtttggaggaacgactggcatttctgctcgacaaggatgcgccggactatcaggag
cggcgcaggccctacgaagagcggttggagtttgagctggatatcatcattcagatgggt
tttcccggctacttcctcatagtgatggacttcatcaagtgggccaaggaaaacggcatt
ccggtagggccggggcgcggctccggtgccggttctctggtggcctatgtgcagaagatt
accgatctggacccgctggaatatgacctgctgttcgaacgcttcctgaacccggaacgt
gtgtccatgcctgacttcgatatcgatttctgcatggataaccgtgacaaagtgattgac
tacgtggcgcgcacctatggtcgcgacgcggtatcgcagatcatcacctatggcaccatg
gccgccaaggcggtggtacgtgacgtcgcacgtgtacagggcaaacccttcggtctggct
gaccgcctctccaagctgatcccgtttgaagtggggatgactctgaacaaggcctgggag
caggaggaaactctgcgcgacttcgtgaatggcagcgaagaagcgcaggaaatcatggag
atggcctacaagctggaaggcgtcacccgcaacgtcggcaaacatgccggcggtgtcgtg
attgcgcccaccaaactgaccgacttctccgccacctactgtgacgaatacggtcagggt
ttggtgacccagtttgacaagaacgatgtggaagaagcgggtctggtgaagttcgacttt
ctgggcctgcgtacactgaccatcatcgactgggcgttagacaccatcaatcgtaagcgc
aggaaaaccggcgaagccgcgcttgagatcgaaaccatcgatctggaagatcctgatacg
tttaagctgctgcagagtgcccagaccactgcggtgttccagctggaatccagcggcatg
aaggatctgattcgccgtcttttgccaaaccggtttgaggatatcatcgcgttggtggcc
ctgttccgtccggggccgctgcaatcggggatggtggacgacttcatcaaccgaaagcat
ggccgtgctccactggcctggccgcaccctgattaccagctcgacagcttgcagcctgta
ctggagcctacctacggcatcatcctgtatcaggagcaggtgatgcagatcgcccaggtg
atggcgggttacacccttggcggcgccgacatgctgcgacgtgcaatgggcaagaaaaag
cccgaagagatggccaaacagcgcagcatcttcctggaagggtgtgccaatcagggaatc
gacaaggacctggcgggcaatatcttcgatctggtggaaaaattcgccggttacggcttc
aacaagtcccactcggcggcctatgcgctggtgtcctatcagactgcctggctgaagcag
cactaccctgctgccttcatggccgccgtgctctcgtccgatatgcagaacaccgacaag
gtggtgatcttcatcgaagagtgtcgtcagatgaaactgacggtacgtctgccggacgtg
aatgacagtgaatacatgttcaccgtcaacgacgccgatgaagtggtgtatggcctcgga
gccgttaagggggtgggtgaaggcccggtggaagctatcgtgcgtgcccgtcaggaaggg
ggtgccttccgtgacctgtttgacttctgtgagcgggtgggggcaggcaaactcaacaag
cgagtgctggaggcgctggtgaggtgcggcgcactggacagtgtgggcccttcgcgtgca
gttctctgggatgcgattccggccgcattgaaggcggccgatcagagtgcgcgcaacgaa
gatgccggcatgatggacctgttcggcgcggtggaggctgaagcgccctcggacccctat
gccgagtttcacaaggcgcgtgactggaccgacaaggagcgcctgcagggcgaaaaggat
acgctggggctctacgttactggtcatccgatcgatgagtatgaagcggagctgaaacat
ctggtcagtcgtaagctggtggagattcagccagatcgtggtcgcagccagaagatggcc
ggtcttgttgtcgacatgcggctgaagaagaccaaaaagggcgataacctctgtttcctg
accctggacgatcgcagtgcgcggcttgaagtcactctgtttggtgatacctatgaagaa
gcccgcaccgtcatcaacaaggacgcggttctggtagtagaaggcgaagtggtacaggat
gactacaatggtgggctcaaggtacgctgtaatcgagtgcaaagcatggctcagatacgt
gcggcacaggcgcgctgtgttgaagtgcagtgcgatacccgccagcttgggccgcgccag
ttacgacagctggctgatactctggcgaaggggcgtagcccgctgatcagcctgtccgtg
gcgctgaggtaccgtcgtgaagacgccgaggcacgggtctggctgggcagtgagtggtcc
gtctcgccgactgatgagctgctgttgcagttgaaggaacagttcggtaacaaggctgtg
cgcctgtgttatgactga
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integrated database retrieval system
