Marinobacterium iners: CFI10_16730
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Entry
CFI10_16730 CDS
T07136
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mgeo
Marinobacterium iners
Pathway
mgeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFI10_16730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgeo03019
]
CFI10_16730
Enzymes [BR:
mgeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CFI10_16730
Messenger RNA biogenesis [BR:
mgeo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CFI10_16730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Dimer_Tnp_hAT
Motif
Other DBs
NCBI-ProteinID:
QSR36598
LinkDB
All DBs
Position
3510971..3512437
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AA seq
488 aa
AA seq
DB search
MSNTLLIILLAFAAAALIAFVMFSRRRTPSTTAPQENLPSAPVAEQLLPLGQRRIVNESE
HQIPRRHLDDNAMKVVYRLQDAGFEGYLVGGCIRDLLLGHTPKDFDIATSAHPEEAEELF
RRGRLIGRRFKLLHVRFGREVIEVATFRASHDQEETTQDQARTAATGMILRDNVYGTIEE
DALRRDFTINALYYDVRDHTVLDFANGYPDLKQRQLRMIGDARERYREDPVRMLRAARFA
AKLGFEVEPGTAAPIRELAALLGNVSPARLFDEVLKLLQSGHGEASYRQLQRFGLFAFLF
PQTDAALEHDEYPVETLLINALCNTDRRLSQGKSVTPAFLFAALLWYPLQLRIKQLEQSS
DLPPIPLLHEAANQVLAEQVRSTAIPRRFSTPVREIWELQLRLPRRQGKKADQLMEHPRF
RAAYDLLVLRENSGEPLQGLSQWWTDYQSSNPMTRRDMVPADQDDKPRRKRRRRPRNRPA
QDSRPSNE
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatactctgctcatcattctgctcgcatttgctgcagcagccctgatcgccttt
gtcatgttcagtcgtcgccgcacacccagtaccacagccccacaggagaacttgccatcg
gcacccgttgccgaacagctgcttccattgggacagcgacgcatcgtcaacgagtccgag
caccagattcctcgtcgtcacctggacgacaatgcgatgaaggttgtctaccggctgcag
gatgccggcttcgagggctaccttgtcggcggatgcattcgcgacctgctgctgggacat
actcccaaggattttgacatcgccacatcagctcaccccgaagaagccgaagagctgttt
cgacgtggtcgcctgattgggcgccgcttcaagctgctgcatgtccgtttcggtcgcgag
gtgattgaggtcgccaccttcagggcatcgcatgatcaggaagagacaactcaggaccag
gcccgcacggctgccaccggcatgatcctgcgcgacaacgtatacggcaccatcgaagaa
gatgccctgcgccgcgacttcaccatcaatgcactttactacgatgtgcgtgaccatacc
gtactcgattttgccaatggctatcccgacctcaaacagcgccagctgcgcatgatcggt
gatgcacgtgaacgctaccgtgaagacccggtgcgcatgctcagggctgcacgttttgca
gccaaactcggttttgaagtggaacccggtaccgcagcgccgattcgagaactggcagcg
ctgcttggcaatgtatcccccgcacgcctgtttgatgaagtactcaaactgctgcagagt
ggacacggcgaggcgtcctaccgacagctgcaacgcttcggcctgtttgccttccttttc
ccgcaaaccgatgcggcgctggagcatgacgagtatccggtggaaaccctgctgatcaac
gccctgtgcaacacggatcgacgtctgtctcaaggcaagagcgtcaccccggcctttctg
tttgcggccttactctggtatccattgcagctgagaatcaaacagctggagcagagctca
gatctgccaccgatcccgctgctgcatgaggccgccaatcaggttctggccgagcaggtc
cgctcaactgccattccacgccgattctcaactcctgtgcgtgaaatctgggaactgcag
ctgcgcctgccgcgtcgacagggcaagaaagccgatcagcttatggagcatcctcgcttc
agagctgcatacgatcttctggtactgcgtgagaacagtggtgagccgctgcagggcctg
agccagtggtggaccgactaccagtcctccaacccgatgacgcgacgtgacatggtcccc
gcggatcaggatgacaagcctcgccgcaaacgtcgtcgtcgcccgcgcaaccgtccggcg
caggacagtcgtcccagcaatgagtaa
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