KEGG   Micropruina glycogenica: MPLG2_0403
Entry
MPLG2_0403        CDS       T05338                                 
Symbol
rpoC
Name
(GenBank) RNA polymerase (beta' subunit)
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
mgg  Micropruina glycogenica
Pathway
mgg03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mgg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MPLG2_0403 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mgg03021]
    MPLG2_0403 (rpoC)
   03400 DNA repair and recombination proteins [BR:mgg03400]
    MPLG2_0403 (rpoC)
Enzymes [BR:mgg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MPLG2_0403 (rpoC)
Transcription machinery [BR:mgg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     MPLG2_0403 (rpoC)
DNA repair and recombination proteins [BR:mgg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      MPLG2_0403 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-ProteinID: SPD85439
UniProt: A0A2N9JD35
LinkDB
Position
1:417217..421098
AA seq 1293 aa
MLDVNFYDELRIGLATADQIREWSHGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSNVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDI
APKDLEKVIYFAAYMITMVDTDARHRDLPSLEAKVEVERKQLESRRDNDVNARMAKLEED
LAQLESEGAKADIKKKVRDGAERELKAVRDRAQREIDRLDAVWQRFKNLKVQDLEGDEIL
YREMKTRFGKYFEGYMGAEAIKNRLATFDLQAESELLREIIATGKGQRKTRALKRLKVVS
AFLNTTNSPSGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLDDLSLAQNIKSAKRMVDRQR
PVVWDVLEEVISEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSTNNILKPADGRPVTMPTQDMVIGHYFLTLEQQGKPGSGR
VFGSVSEAIMAFDRGDLAIGAPITLRLRDIVPPEGQELRADGSIMLKTTLGRALFNEALP
TDYAFVNVEVGKKKLGQIVNDLAERYPKIEVAATLDRLKDLGFRWATRSGVTVSISDVQT
PPTKPEILAGYEAKAAKITKQYERGKVTDEERHQELVQLWTDATAELTAAMEANFTRDNP
IFMMVHSGARGNMTQMRQIAAMRGLVANPKGEIIARPIKSNFREGLSVLEYFISTHGGRK
GQADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLTKVIAEEGRGGKLVAAGNVET
AVYARTLATDVTNADGKVLVKAGVDLGDVNIRKLLKNGITEVKVRSVLTCEAASGTCAMC
YGRALATGKLVDVGEAVGIVAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVVELFEA
RQPKGKAPIAEAAGRIRIEDGERNRKLVIVRDDGEEDVEYLLPRRVRLDWEDNTGVRHSI
VDGDHIAAGAQLYAGTPDPQDVLRVSGLRKVQEHLVEEVQAVYATQGAPIHDKHIEIIIR
QMLRRITVIESGDTSMLPGELVDRNTFETQNRQMVTEGRMPAQGRPVLMGITKASLATES
WLSAASFQETTKVLTDAAIHAKSDSLVGLKENVILGKLIPAGTGLERYRNIRVEPTAEAR
AAAYEFSYDPYDYDMAGSGMAVSLDEFDIGDLR
NT seq 3882 nt   +upstreamnt  +downstreamnt
gtgttggacgtgaacttctacgacgagctgcgcatcgggcttgccaccgcggaccagatc
cgcgaatggagccacggcgaggtcaagaagcccgagacgatcaactaccgcacgctcaag
cccgagcgtgacggcctgttctgcgagaagatcttcggccccacccgcgactgggagtgc
tactgcggcaagtacaagcgggtgcgcttcaagggcatcatctgcgagcgctgtggcgtc
gaggtcacccgcagcaacgtgcgccgcgagcgcatgggccacatcgagctcgccgccccg
gtcacccacatctggtacttcaagggtgtgccgagccggctcggctacctgctcgacatc
gcgccgaaggacctcgagaaggtcatctacttcgccgcgtacatgatcaccatggtcgac
accgacgcacgccatcgcgatctgccctcgttggaggccaaggtcgaggtcgagcgcaag
cagctcgagtcgcgtcgcgacaacgacgtgaacgcgcgcatggccaagctcgaggaggac
ctggctcagctcgagagcgagggcgccaaggccgacatcaagaagaaggtgcgcgacggc
gccgagcgcgagctcaaggccgtccgcgaccgggcgcagcgtgagatcgaccgtctcgac
gcggtgtggcagcggttcaagaacctcaaggtgcaagacctcgagggcgacgagattctc
taccgtgagatgaagacgcgcttcggcaagtacttcgagggctacatgggtgccgaggcg
atcaagaaccgcctggccaccttcgacctgcaggccgagtccgagttgctgcgcgagatc
atcgccaccggtaagggccagcgcaagacccgcgcgctgaagcggctcaaggtcgtctcg
gcgttcctgaacaccaccaacagcccctcgggcatggtgctcgacgccgtgccggtgatt
ccgccggatctgcggccgatggtgcagttggacggtggccgcttcgcaacctcggacctc
aacgacttgtaccgccgggtgatcaaccgcaacaaccggctcaagcgactgctcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctgcaggaggctgtcgacagc
ctcttcgacaacggccgccgcggccgtccggtcaccgggccgggcaaccgtccgctcaag
tcgatctcggacatgctgaagggcaagcagggccggttccgccagaacctgctgggcaag
cgcgtcgactactcgggccgttcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggcctgcccaaggcgatggcgctggagctgttcaagccgttcgtgatgaagcggctc
gacgacctgagcctggcgcagaacatcaagagcgccaagcgcatggttgaccgccagcgt
ccggtggtgtgggacgtgctcgaagaggtcatctccgagcacccggtgctgctcaaccgt
gcacccaccctgcaccgtctgggtattcaggcgttcgagccgcaactgatcgagggcaag
gcgattcagatccacccgctggtctgcaccgccttcaacgccgacttcgacggcgaccag
atggccgtgcacctgccgctttcggctgaggcgcaggccgaggctcgcatcctgatgctg
tcgacgaacaacatcttgaagccggcggacggtcgtccggtgaccatgccgacccaggac
atggtgattgggcactacttcctcaccctcgagcagcagggcaagccggggtccggacgg
gtgttcggctcggtgtccgaggcgatcatggcgttcgaccgtggcgacctggcgatcggt
gcgccgatcactctgaggctgcgcgacatcgtgccgcccgaggggcaggaactgcgcgcc
gacgggtcgatcatgttgaagaccacgctgggccgcgccctgttcaacgaggcgctgccg
accgactacgcgttcgtcaacgtcgaagtgggcaagaagaagctgggccagatcgtcaac
gacctggccgagcgctaccccaagatcgaggtcgcggccacccttgaccggctcaaggac
ctgggcttccgctgggccacccgctcgggtgtgacggtgtcgatctccgacgtccagacc
ccgccgaccaagcccgagatcctggccggctacgaggccaaggccgccaagatcaccaag
cagtacgagcgcggcaaggtcaccgacgaggagcgccaccaggagctggtgcagctgtgg
accgacgccaccgcggagttgaccgcggcgatggaggccaacttcacccgtgacaacccg
atcttcatgatggtgcactccggcgcgcgagggaacatgacccagatgcgccagatcgcc
gccatgcgaggtctggtggccaacccgaagggcgagatcatcgcccggccgatcaagtcg
aacttccgtgagggcttgagcgtgctggagtacttcatctccacccacggtggccgtaag
ggccaggccgatacggcgctgcgcaccgccgactcgggttacctgacccggcgcctggtg
gacgtgagccaggacgtcatcatccgcgaggaggactgcggcaccgagcgcggcctcacc
aaggtgatcgccgaagagggtcggggaggcaagctggttgcggccggcaacgtcgagacg
gccgtctacgcccgcacgctggccaccgacgtgaccaacgccgacggcaaggtgctggtg
aaggccggggtcgacctgggcgacgtcaacattcgcaagctgctcaagaacggcatcacc
gaggtgaaggtgcgttcggtgctgacctgtgaggcggcgtccggtacctgcgcgatgtgc
tacggccgtgcgttggccaccggcaagttggtcgatgtcggcgaggcggtcggtatcgtc
gcggcgcagtcgatcggcgagcccggcacgcagctcaccatgcgtaccttccacaccggt
ggtgtggccggtgacgacatcacgcagggtctgccccgtgtggtggagttgttcgaggcc
cgtcagcccaagggcaaggccccgatcgccgaggccgccggccgcattcgcatcgaggac
ggcgagcgcaaccgcaagctggtcatcgtgcgcgacgacggcgaagaggacgtggagtac
ctgctgccgcggcgcgtgcgcctcgactgggaggacaacaccggggttcggcactcgatc
gtcgacggcgatcacatcgccgccggtgcgcagctctacgccggtacccctgatcctcag
gacgtgctgcgggtgagcggcctgcgcaaggtgcaggagcacctggtcgaagaggtgcag
gccgtgtacgccacccagggggcgccgattcacgacaagcacatcgagatcatcattcgg
cagatgctgcgccgaatcacggtgatcgagtcgggtgacacctcgatgctgcccggtgag
ctggtcgaccggaacaccttcgagacccagaaccgccagatggtcaccgagggtcgcatg
ccggcccagggccgtccggtgctgatgggcatcacgaaggcgtcgctggcgaccgagtcg
tggttgtctgcggcctcgttccaagagaccaccaaggtgctcaccgacgcggcgatccac
gccaagtccgacagcctggtgggcctgaaggagaacgtgatcctgggcaagctgatcccg
gccggcaccggcctggagcggtaccgcaacattcgggtcgagcccaccgcggaggcccgc
gccgccgcgtacgagttcagctacgacccgtacgactacgacatggccggttcgggcatg
gcggtgtcgttggacgagttcgacatcggcgacctgcgctga

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