Micropruina glycogenica: MPLG2_1599
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Entry
MPLG2_1599 CDS
T05338
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mgg
Micropruina glycogenica
Brite
KEGG Orthology (KO) [BR:
mgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgg03019
]
MPLG2_1599 (hrpA)
Enzymes [BR:
mgg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MPLG2_1599 (hrpA)
Messenger RNA biogenesis [BR:
mgg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MPLG2_1599 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_22
AAA_19
HA2_N
AAA_30
nSTAND3
T2SSE
NACHT
SLFN-g3_helicase
AAA_23
SRP54
Motif
Other DBs
NCBI-ProteinID:
SPD86635
UniProt:
A0A2N9JGJ4
LinkDB
All DBs
Position
1:complement(1575618..1579529)
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AA seq
1303 aa
AA seq
DB search
MSEPALSLAVDPALPIAAWADDIVAAVRDHQVLIVAGETGSGKTTQLPKLCLAAGRTRVG
HTQPRRIAARSLAERIAEEIGTPLGDVVGYQVRFTAKTSRQTRVKVMTDGILLAEIAHDR
DLRRYDTLIIDEAHERSLNIDFLLGYLKQLLPRRPDLNLIVTSATIDTQRFSEHFGGAPI
IEVSGRTYPVEVRWRPVIEQGTDRDLIDGICDAVTELMIDGPDGDILVFCSGERDIRDAA
DAIGALDWRALTPREVEILPLYARLSAHEQHRVFAPHRGLRVVLATNVAETSLTVPGIRS
VVDPGFARISRYSARTKVQRLPIEAISQASANQRAGRCGRVAPGVCIRLYDEDDFEARPE
FTEPEILRTNLAAVILQMAQAKLGDIERFPFVEPPDSAQISDGLRLLRELGAIESDAQHP
VTPARPVTPARPVIPANAGISSSGVSTSSTSRGGVSTGSTSGGGRKRRRGGHVRLTPIGH
QLARLPVDPRLGRMLVEAERQGCLREAQAVVAGLTIQDVRERPAEFQQQADALHRRFFSD
DPEATGGRDPSDVAALQRLWNYLRTARKERSGNAFRRMCRDEYLNFLRVREWEDLNEQLK
TVCRDLGMNRNTEPAGIDRLHIAVLSGLLSHVGLLDERTTTRPGERRRGPREYLGARGSR
FAISPGSAAARINPPLVMAVELVETTRLWARTVAPIDEAWVEEVGAHLLSRTYSEPRWSA
RSGQAVATERVTLLGVPIVAGRTVSYGRIDPDESRRLFLQAALVEGQWHTRHHFWARNEA
ARAAAEELAERTRRHDLLADDAALFAFYDARIPADVVSVAHFDRWWRDARRREEHLLDLP
SDVLLPQGESVDADDFPDHWSSGELDLPVSYVFDPGSGHDGVTVSIELAQLNQVTADDFG
WQIPGLRQELVTALVRGLPKQWRAKLVPAPDTARRAVAWLDEHRVAGEALTDGLGRAIRQ
LTGVQVPADAWQLDAVPDHLRVRFVVTRDGAEVAAGKDLPELAERLGSKVRAELNVEASE
HTHSGATNWAFSTIADRVEGTVVGYPALSDRGDRVGVTVFATEPEARSSHLLGLRRLVAL
TSPEVTNWVVSRLSNPTKFALAASPYPTVPALLADARLKAIETLILTAGDPWLVRDDAAF
AALRDRVRADAADQTLSVVTTAGDVLQRHQRVQLALPGATEPVRRDVTEQLAGLVHRGFV
AGTPDPHWQRLPRYLHAVELRLAAARANPARDAVNAEIIDGLEDEYAALCARYPAGPLPT
DVAGVGWLLEELRVSLFAQSLGTSAPISAKRVRTAMAGVTPPR
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaacccgcgctctcactggccgtcgacccggcgctgccgatcgctgcgtgggcc
gacgacatcgtggcggccgttcgcgaccaccaggtgctgatcgtggcgggcgagaccggt
tcgggcaagaccacccagttgcccaagctctgcctcgccgccggacgaacccgcgtcggt
cacacccagccccgccgcatcgccgcgcgcagcctggccgaacgcatcgccgaagagatc
ggcacgccgctgggtgacgtggtgggctaccaggtgcggttcaccgcgaagaccagccgg
cagacccgggtcaaggtgatgaccgacggcattctgctggccgaaatcgcccacgaccgc
gacctgcgccgctacgacaccctgatcatcgacgaggcccacgagcgcagcctcaacatc
gactttctgctcggctacctcaagcaactgttgcccaggcgacccgacctaaacctgatc
gtcacctcggccaccattgacacccagcgattctcagagcacttcggcggcgcgccgatc
attgaggtgtcgggccgcacctacccggtcgaggtgcgctggcgtccggtgatcgagcag
ggtaccgaccgcgacctgatcgacggcatctgcgacgccgtcaccgagttgatgatcgac
ggccccgatggcgacattctggtgttctgttccggcgagcgcgacattcgtgacgccgcc
gacgcgatcggtgcgctcgactggcgtgccctcaccccccgcgaggtcgagatcctgccc
ctgtacgcgcggttgagcgcgcacgagcagcaccgggtcttcgccccgcaccgtgggctg
cgggtggtgctggccaccaacgtcgccgaaacgtcgctcacggtgccggggatccgctcg
gtggtcgaccccggcttcgcccgcatctcgcgctactcggcgcgcaccaaggtgcaacgg
ctgcccatcgaggcgatctcacaagcctcggccaaccagcgggccggacgctgcggacgc
gtcgcgcccggcgtctgcattcggctctacgacgaagacgacttcgaggcgcggccagag
ttcaccgagcccgagattctgcgtaccaacctggccgcggtgattctgcagatggcgcag
gccaagctgggcgacatcgagcgcttcccgttcgtcgaaccgcccgactcggcccagatc
agcgacggcctgcggctgctgcgtgagctgggtgcgatcgagtcggacgcgcagcacccc
gtcaccccggcccgccccgtcaccccggcccgccccgtcatcccggcgaacgccgggatc
tcatccagtggggtctcgacaagctcgaccagccgtggtggggtctcgacaggctcgacc
agcgggggtgggcgcaagcgccggcgcggcgggcacgttcggctcaccccgatcggtcac
caactcgcccggctgcccgtcgacccgcggctgggccgcatgctcgtcgaggccgagcgg
cagggctgcctgcgcgaggcacaggcggtggtggccgggctgaccattcaagacgtccgc
gagcgccctgccgagtttcagcagcaggcggacgccctgcatcggcgcttcttcagcgac
gacccggaggcgaccgggggtagagacccgtccgacgtcgccgccctgcagcggctctgg
aactacctgcgcaccgcccgcaaagaacgttcgggcaacgcctttcgccgcatgtgtcgc
gacgagtacctgaactttctgcgcgtgcgcgagtgggaagacctcaacgagcaactcaag
accgtgtgccgcgacctcggcatgaaccgcaacaccgaaccggccggaatcgaccggttg
cacatcgcggtgctgtcgggcctgctctcgcacgtgggcctgctggacgagcgcaccacc
acccgtccgggcgagcgccgacgtggcccgcgcgaatacctgggtgcgcgcggcagccgc
ttcgcgatcagccctgggtcggccgccgcccgcatcaacccgcccctggtgatggcggtc
gaactggtcgagaccacgcggctgtgggcccgcaccgtggcgccgatcgacgaggcctgg
gtcgaagaggtcggcgctcacctgctgagccgcacctattccgagccgcgctggtcggcc
cgcagcggccaggcggtggccaccgaacgcgtcaccctgctgggggtgccgatcgtggcc
ggccgcaccgtcagctacgggcgcatcgaccccgacgagtcgcggcggctgttccttcag
gccgccctggtcgaaggccagtggcacaccaggcaccacttctgggcccgcaacgaggcg
gcgcgcgcggctgccgaagagctggccgaacgcacccgacggcacgacctgctggccgac
gacgcagcgttgttcgccttctacgacgcccgcattccggccgacgtggtgtcggtggcc
cacttcgaccgctggtggcgcgacgcccggcgccgcgaagagcatctgctcgacctgccg
tccgacgtgttgttgccgcagggcgaatcggtcgacgccgacgactttcccgatcactgg
agcagcggcgagctcgacctgccggtcagctacgtgttcgaccccggctcgggccacgac
ggcgtcacggtgtcgatcgagttggcccagctcaatcaggtgacggccgacgacttcggc
tggcagatacccgggctgcggcaggagttggtcaccgccctggtgcgcgggctgccgaaa
cagtggcgggccaagctcgtgcccgcgcccgataccgcccgccgcgccgtcgcctggctc
gacgagcaccgggtcgcgggtgaggcgctgaccgatgggctgggccgggcgattcggcag
ctcaccggcgtacaggtgcccgcagacgcgtggcagctcgacgcggtgcccgaccacctg
cgggtgcggttcgtggtcacccgcgacggtgccgaggtcgcggccggcaaagacctgccc
gaacttgccgaacgactcggttcgaaggtgcgcgccgagttgaacgtggaggcgtccgaa
cacacccacagcggcgcaacgaactgggccttcagcacgatcgccgaccgggtcgagggc
accgtggtcggttatccggccttgtcggaccgcggtgaccgggtgggggtcacggtgttc
gcgaccgagccagaggcccgcagttcgcacctgctggggctgcgccggctggtcgcgctg
accagccccgaggtgaccaactgggtggtgtcgaggctgagcaaccccacgaagttcgca
ctggccgcgtccccctacccgaccgtaccggcgctgctggccgacgccaggctgaaggcc
atcgagaccttgatactgaccgccggcgacccatggctggtgcgtgacgacgcggcgttc
gccgcgcttcgcgaccgggtgcgggccgatgccgccgatcaaaccctttcggtggtgacc
accgccggcgacgtgctgcagcgccaccagcgcgtgcagttggcgctgcccggggccact
gagccggtgcggcgtgacgtcaccgagcagttggcggggctggtgcaccgcggtttcgtg
gccggcacgcccgacccgcactggcagcggctgccgcgctacctgcacgccgtcgagctg
cggctggctgccgcccgggccaacccggcccgcgacgcggtgaacgccgagatcatcgac
gggctcgaagacgagtacgcggccttgtgcgcccgctacccggccgggccgctgccgacc
gacgtcgcaggcgtcggctggctactggaagaactgcgggtcagcctgttcgcccagtcg
ctcggcacgtcggcaccgatctcggcgaaacgcgtccgtacggcgatggccggggtcacc
ccaccccggtga
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