Mycolicibacterium gilvum PYR-GCK: Mflv_1394
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Entry
Mflv_1394 CDS
T00498
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mgi
Mycolicibacterium gilvum PYR-GCK
Brite
KEGG Orthology (KO) [BR:
mgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgi03032
]
Mflv_1394
03400 DNA repair and recombination proteins [BR:
mgi03400
]
Mflv_1394
Enzymes [BR:
mgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Mflv_1394
DNA replication proteins [BR:
mgi03032
]
Prokaryotic type
DNA Topoisomerases
Mflv_1394
DNA repair and recombination proteins [BR:
mgi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mflv_1394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Rep_1B
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ABP43876
UniProt:
A4T5R5
LinkDB
All DBs
Position
1449866..1452691
Genome browser
AA seq
941 aa
AA seq
DB search
MADGDRGSGKNGSVRRLVIVESPTKARKIAGYLGSNYVVESSRGHIRDLPRAAADVPAKY
KSEPWARLGVNVDADFEPLYIISPDKKATVADLKDKLKNVDELYLATDGDREGEAIAWHL
LETLKPRIPVKRMVFHEITEPAIRAAAEDPRDLDNDLVDAQETRRILDRLYGYEVSPVLW
KKVAPKLSAGRVQSVATRIIVQRERERMAFRSAGYWDVTAELDASVSDAQATPPTFVAKL
NTVDGRRVAAGRDFDSLGAVKKPGEVLVLDEAAANALAGGLRGAQLSVSSVEQKPYTRRP
YAPFMTSTLQQEAGRKLRMSSERTMSIAQRLYENGYITYMRTDSTTLSQSAIDAARNQAR
QLYGEEYVHPTPRQYTRKVKNAQEAHEAIRPAGDVFQTPGQLHSQLDTDEFRLYELIWQR
TVASQMADARGTTLSLRIAGAATSGEQVVFNASGRTITFAGFLKAYVESLDEQAGGEADD
AESRLPNLTQGQRVDAKDLTADGHTTSPPARYTEASLIKALEDLGIGRPSTYSSIIKTIQ
DRGYVHKKGSALVPSWVAFAVIGLLEQHFSRLVDYDFTAAMEDELDEIAAGNERRTNWLN
NFYFGGEHGVEGSIAREGGLKKLVGGNLEEIDAREVNSIKLFDDSEGRAVNVRVGRNGAY
LERMVADPDNPGELKPQRANLKDELTPDELTLELAEKLFATPQEGRSLGIDPATGHEIVA
KDGRYGPYVTEVLPEPPDDGEAGATAKKGKKPTGPKPRTGSLLRSMDLETVTLDDALRLL
SLPRVVGVDPANGEEITAQNGRYGPYLKRGTDSRSLATEEQMFDITLEEALKIYAEPKRR
GRQGAATPPLRELGVDPVSEKPMVIKDGRFGPYVTDGETNASLRKGDDVMSITDARASEL
LADRRARGPVKKKAAKKAAVKKTAAKKAAKKAPAKKAAKKA
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
gtggctgacggggaccgcggcagcggcaagaacgggtccgtgcggcgactcgtcatagtc
gagtcgccgaccaaagcgcgcaaaatcgcaggttatctggggtcgaactacgtcgtcgag
tcctcccgcgggcacatccgcgacctgccgcgcgcggccgccgacgtcccggccaagtac
aagtcggaaccgtgggcgcgcctcggcgtcaacgtcgacgccgacttcgagccgctctac
atcatcagcccagataaaaaggccaccgtcgccgatctgaaggacaagctcaagaacgtc
gacgagctctatctggccaccgacggtgaccgcgagggcgaggcgatcgcctggcatctg
ctggagacgctgaaaccgcgcatcccggtcaagcggatggtgttccacgagatcaccgag
cccgcgatccgcgcggccgccgaggacccccgcgacctcgacaacgacctggtcgacgcc
caggagacccgtcgcatcctggaccgtctctacggctacgaggtcagccccgtgctgtgg
aagaaggtcgcgccgaagctgtcggccggccgcgtgcagtcggtggcgacgcgcatcatc
gtccagcgcgaacgcgagcggatggcgttccgcagcgccggctactgggacgtcaccgcc
gaactcgacgccagcgtgtccgacgcgcaggccacaccgcccacgttcgtcgcgaagctc
aacaccgtcgacggccgccgcgtggccgcaggccgcgatttcgactccctcggcgcggtc
aagaagcccggtgaggtgcttgtcctcgacgaagccgccgcgaacgcgctggccggtggt
ctgcgcggcgcccagctgtcggtctcctcggtcgagcagaagccctacacccgccgcccg
tacgcgccgttcatgacctcgacgctgcagcaggaagccggccgcaagctgcggatgtcc
tcggagcgcacgatgagcatcgcgcagcgtctgtacgagaacggctacatcacctacatg
cgtaccgactcgaccacgctgtcgcagtcggccattgacgccgcacgcaaccaggcccgc
cagctctacggcgaggagtacgtccacccgacgccgcgccagtacacccgcaaggtcaag
aacgcgcaggaggcccacgaggccatccgccccgccggtgacgtgttccagacccccggc
cagctgcacagccagctcgacaccgacgagttccgtctctacgagctgatctggcagcgc
accgtcgcctcccagatggccgacgcccggggtacgacgctgagcctgcggatcgccgga
gctgccaccagcggtgagcaggtcgtcttcaacgccagcggtcgcacgatcaccttcgcg
ggcttcctgaaggcgtacgtcgagagcctcgacgagcaggccggcggcgaggccgacgac
gccgagagccggctgccgaacctgacccagggtcagcgtgtcgacgccaaggacctgacc
gccgacggccacaccacttcgccgcccgcgcgctacaccgaggcgtcgttgatcaaggct
ctcgaagatctcggaatcggccggccgtcgacgtacagctcgatcatcaagaccatccag
gaccgcggctatgtccacaagaagggcagcgcgctggtcccgtcgtgggtggcgttcgcc
gtgatcggcctgctggagcagcatttcagccggttggtcgattacgacttcaccgccgcg
atggaagacgagctcgacgagatcgccgccggcaacgagcgacggaccaactggctcaac
aacttctacttcggcggcgagcacggagtcgagggctcgatcgcccgggagggcgggctc
aagaaactggtcggcggcaacctcgaagagatcgacgcccgagaagtcaactccatcaag
ctgttcgacgattcggaaggtcgcgcggtcaacgtccgcgtcggccgcaacggcgcgtat
ctggagcggatggttgcggaccctgataatccgggtgagctgaagccgcagcgcgccaac
ctcaaggacgagctgacgcccgacgagctgaccctggagctggccgagaagctgttcgcc
acaccgcaagaggggcgttcgctggggatcgacccggcgacgggacacgagatcgtcgcc
aaggacgggcgttacggaccgtacgtcaccgaggtcctgcccgagccgcccgatgacggt
gaggccggggcgacggccaagaaaggcaagaagccgaccggccccaagccgcgtaccggt
tcgctgctgcggtcgatggacctggagaccgtcaccctcgacgacgcgctgcggctgctc
tcgctgccccgcgtggtcggtgtcgaccccgccaacggtgaggagatcaccgcgcagaac
ggccgctacggcccatatctgaagcgcggcaccgattcccggtcgttggcgaccgaagag
cagatgttcgacatcacgctcgaggaggccctcaagatctacgccgagcccaagcgccgg
ggccgccagggtgcggcgaccccgccgctgcgtgaactcggcgtggacccggtctcggag
aagccgatggtgatcaaggacggccgcttcggcccgtacgtcaccgacggcgagaccaac
gcgagtctgcgcaagggcgacgacgtcatgtcgatcaccgatgcgcgcgcatccgaactg
ctcgccgaccgccgtgcgcgcggtccggtgaagaagaaggccgcgaagaaggccgcagtg
aagaagaccgcagcgaagaaggccgccaagaaggcgccggcgaagaaagcggccaagaag
gcctga
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