Mycolicibacterium gilvum PYR-GCK: Mflv_3095
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Entry
Mflv_3095 CDS
T00498
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
mgi
Mycolicibacterium gilvum PYR-GCK
Brite
KEGG Orthology (KO) [BR:
mgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgi03019
]
Mflv_3095
Enzymes [BR:
mgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Mflv_3095
Messenger RNA biogenesis [BR:
mgi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Mflv_3095
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND3
AAA_30
Adenine_deam_C
Motif
Other DBs
NCBI-ProteinID:
ABP45572
UniProt:
A4TB42
LinkDB
All DBs
Position
3277879..3280644
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AA seq
921 aa
AA seq
DB search
MTNPPDPAPESLTAFTALLPFSLDGFQRRACEALAQGHGVLVCAPTGAGKTVVGEFAVHL
ALEAGRKCFYTTPIKALSNQKHNDLVRRYGPERIGLLTGDQAINGDADIVVMTTEVLRNM
LYADSPALHGLSHVVMDEVHFLADRMRGAVWEEVILHLPEEVRLVSLSATVSNAEEFGGW
IKTVRGDTTVVVDEHRPVPLWQHVMVGRRLLDLFDYRGSGPSGRDLLVDPELLRHIAHRR
EAERLVDWQPRGRGRDRQGRQPSLYRTPGRAEVIGVLEQSRLLPAITFIFSRAGCDAAVK
QCLRSSLRLTTNEERARIAEIVDRRTADLNDTDLVVLDFHQWREGLLRGIAAHHAGMLPT
FRHTVEELFTAGLVKAVFATETLALGINMPARTVVLERLVKYNGEQHMPLTPGEYTQLTG
RAGRRGIDVEGHAVVLWNPDVDPAEVAGLASTRTFPLRSSFAPTYNMTINLVHQMGPAQA
HRLLERSFAQYQADRSVVGLVRGAERGERMLAELAAEMGGPDAPILDYVRLRAQISERER
AQSRASRLQRRQAINDALAALRRGDIVTISQGKHGGLAVVLEPARDADDPRPLVLSEHRW
AGRISSADYGAAAGPIGKMTLPKHVEHRNPRARRDLASALRSAAATLDVPSAQRRRGRGP
VDGDVDPELISLRNRLRAHSAHSLDDREERARVAERYLRIERDNEQLRKKIASATNSLAV
TFDRIVVLLTERGFIAPGDTPTVTEDGRLLSRIYSESDLLVAECLRAGVWEELDAAELVA
ALSSVLYESRRDGQGPGDGSDIPTGRLRRALNRTRALWADLRTDEQRHRITYSREPDTGF
VAVIHRWASTGDLASALAAGAASAAGGTASSMSAGDFVRWCRQVLDLADQVRNAAPSPAL
RATAKRAIADVRRGVVAVDAG
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatccacctgatccggcaccggagagcctgaccgccttcaccgcgctgctgccg
ttctcgctggacgggttccagcgtcgagcgtgcgaggcgctcgcccagggacacggggtg
ctggtctgcgcgcccaccggcgccggtaagaccgtcgtcggcgagttcgcggtgcatctg
gcgctggaggccgggcgcaagtgcttctacaccaccccgatcaaggcactgagcaatcag
aagcacaacgacctggtgcgtcgctacggcccggaacgcatcggtctgctgaccggcgac
caggccatcaacggtgacgccgacatcgttgtgatgaccaccgaggtgctccgcaacatg
ctctatgcggattcccctgcgctgcatgggctttcccatgtggtgatggacgaggtgcac
ttcctggccgaccgcatgcgcggtgcggtgtgggaggaggtgatcctgcacctgcccgaa
gaggtccggctggtgagcctgtcggcgacggtgagcaacgccgaggagttcggcggctgg
atcaagacggtgcgcggggacaccaccgtcgtcgtcgacgagcatcgcccggtgccgctg
tggcagcacgtgatggtcggcaggcgactgctggacctgttcgactatcgcggatccggg
ccgtccggccgcgatctgctcgtcgatccggagttgctgcgccacatcgcgcaccgccgc
gaggccgaacgcctggtcgactggcaaccgcgcggtcgggggcgtgaccggcaggggcgg
cagcccagcctgtaccgcacacccgggcgggccgaggtgatcggggtgctggagcagagc
cggctgctgccggcgatcacgttcatcttctcccgggccgggtgcgacgccgcggtcaag
cagtgcctgcggtcgtcgttgcggctgacgacgaacgaggaacgggcccgcatcgccgag
atcgtcgatcgccgcaccgccgacctcaacgacacggacctggtcgtgctcgatttccac
cagtggcgcgaggggctgctcagaggtatcgcggcccaccacgccgggatgctgccgacc
ttccgccacaccgtcgaggagctcttcaccgccggactggtgaaggccgtgttcgccacg
gagacactggctctgggcatcaacatgcccgcccgcacggtcgtgctggaacgtctggtc
aagtacaacggcgagcagcacatgccgctcacgccgggggagtacacccagctcaccggc
cgagcgggccgccgcggcatcgacgtggagggccacgccgtcgtcctgtggaaccctgat
gtcgatcccgcggaggtcgccggtctggcctcgacgcgcaccttcccgctgcgcagctcg
ttcgcgccgacttacaacatgaccatcaacctggtccaccagatgggtcccgcacaggcg
caccgactgctggaacggtcgttcgcgcagtatcaggccgaccgctcggtcgtcgggctg
gtccgcggcgccgaacgcggggaacgcatgctcgccgaactcgccgccgagatgggcgga
cccgacgcgccgatcctcgactacgtccggctgcgcgcccagatctccgaacgcgaacgc
gcgcagtcgcgggcgtcgcggctgcagcgcagacaggcgatcaacgacgcgctcgcggcc
ctgcgccgcggcgacatcgtcacgatctcccagggcaaacacggtgggctcgcggtggtg
ctggagccggcccgcgacgccgacgacccgcgcccgctggtgctgtccgaacaccgctgg
gcgggccggatctcctccgctgactacggcgcggcggcaggcccgatcgggaagatgaca
ctgcccaaacacgtcgagcaccgcaatccgcgggcccgtcgcgacctcgcctcggcgttg
cggtcggcggcggccacgctggacgtcccgtcggcgcagcggcgccgaggccgcggcccg
gtcgacggcgacgtcgatcccgagttgatctccctgcgcaaccggctccgggcgcattcg
gcgcacagcctcgacgaccgcgaggagcgtgcccgcgtcgcggagcgctacctgcgcatc
gagcgggacaacgaacagctgcgcaagaagatcgcctcggcgacgaactcgctcgcggtc
accttcgaccggatcgtggtcctgctgaccgaacgcggtttcatcgccccgggcgacacg
ccgacggtcaccgaggacgggcgcctgctgtcgcgcatctacagcgagagcgacctgctg
gtggccgagtgtctgcgcgccggtgtctgggaggaactcgacgccgccgaactcgtcgcg
gcgctgtcgtcggtgctctacgagtcgcgccgcgacgggcagggcccgggcgacgggtcc
gacatcccgaccgggcgcctccgtcgggcgctgaaccggacccgggcgctgtgggccgat
ctgcgcaccgacgaacagcggcaccgcatcacgtacagccgggagcccgacaccgggttc
gtcgcggtcatccaccgctgggcgagcaccggggatctcgcctccgcgctcgccgcgggc
gccgcgtcggccgccggcgggaccgcctcctcgatgtcggcgggtgacttcgtccggtgg
tgcaggcaggtgctcgatctggccgatcaggtgcgtaacgccgcgccgtcaccggccctg
cgggcgaccgcgaaacgcgccatcgccgacgttcggcgcggcgtcgtagctgttgatgcc
gggtag
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