Mycolicibacterium gilvum PYR-GCK: Mflv_3921
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Entry
Mflv_3921 CDS
T00498
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mgi
Mycolicibacterium gilvum PYR-GCK
Brite
KEGG Orthology (KO) [BR:
mgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mgi03016
]
Mflv_3921
Enzymes [BR:
mgi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Mflv_3921
Transfer RNA biogenesis [BR:
mgi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Mflv_3921
BRITE hierarchy
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ABP46392
UniProt:
A4TCS3
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All DBs
Position
4181124..4182398
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AA seq
424 aa
AA seq
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MPEPETAGSAPETPEPTDIEAEPLLTPRDGVPDVSSSRMEIARAADLLASGTGPFAVDAE
RASGFRYSNRAYLVQIRRVGAGTVLIDPVSHGGDPMEVLAPVAAVLSTDEWVLHAADQDL
PCLAEIGMRPTALYDTELAGRLANFDRVNLAAMVQRLLGLQLTKGHGAADWSKRPLPDEW
LNYAALDVEVLTDLREAIAAVLDEQGKAEWARQEFEYLRTFEGSPTRRDRWRRTSGIHKV
RDPRALAAVRELWTTRDQIARRRDIAPGRILPDSAIISAATANPDTIEKLTALPVFGGSK
QRRSAQVWLDALARARTNDPPDAQEPSNGPPPASRWSRRKPEAAVRLEAARAELTALAQQ
VSVPVENLLSPETVRRLCWDWQPPADGDATAAVEAFLRDSTARQWQRELTVPALGRALSE
PPVS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacccgagaccgccggctccgcgccggaaacacctgaaccgaccgacatcgag
gccgaacctcttctcaccccgcgcgacggggtgccggacgtgtcgtccagccgcatggaa
atcgccagggcggcagaccttctcgcgtcgggtaccggtcccttcgccgtcgatgccgaa
cgcgcgtcgggcttccggtactccaaccgcgcgtatctggtgcagatccgtcgcgtcggg
gcgggaacggtgctcatcgaccctgtcagccacggcggcgacccgatggaggtcctggcc
ccggtggccgcggtcctctccaccgacgagtgggtgctgcacgccgccgaccaggacctg
ccgtgcctggccgagatcggcatgcgccccaccgcgctctacgacaccgaactcgcgggc
cgcctcgccaacttcgaccgggtgaacctcgccgccatggtgcagcgtctgctcggcctg
cagttgaccaagggccacggcgcggccgactggtccaagcggccgctgcccgacgagtgg
ctgaactacgccgccctcgacgtcgaggtgctgaccgatctgcgcgaggcgatcgccgcg
gttctcgatgagcagggcaaggccgaatgggcacgccaggagttcgagtacctgcgcacg
ttcgaaggatcccccacgcgccgggaccggtggcgccggacctcgggtatccacaaggtg
cgcgacccccgggcgttggccgcggtgcgcgaactgtggaccacccgcgaccagatcgcg
cggcgccgcgacatcgcccccggacggatcctgcccgacagcgcgatcatcagcgccgcc
accgccaaccccgacaccatcgaaaagctcacggccctaccggttttcggtggctcgaag
cagcgccgcagcgcccaggtgtggctcgacgcgctcgcgcgcgcccgcaccaacgaccca
cccgacgcgcaggaaccgtccaacggtcccccgccggcgtcgcgctggtcgcggcgcaag
ccggaggcggcggtacgactggaggccgcccgcgccgaattgaccgcgctcgcccaacag
gtgtcggtaccggtcgagaacctgctgtccccggagaccgtgcggcggctgtgctgggac
tggcagccgcccgccgacggcgacgccaccgctgcggtggaggcgttcctgcgcgactcg
acggccagacagtggcaacgcgagctgaccgtgccggcgttgggccgggcgctcagtgag
cccccggtcagctga
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