Mucilaginibacter ginkgonis: GO620_000230
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Entry
GO620_000230 CDS
T07235
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mgik
Mucilaginibacter ginkgonis
Pathway
mgik03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mgik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GO620_000230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgik03400
]
GO620_000230
Enzymes [BR:
mgik01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GO620_000230
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GO620_000230
DNA repair and recombination proteins [BR:
mgik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GO620_000230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
GP7
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
QQL49913
UniProt:
A0A6I4HZS9
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All DBs
Position
44472..45245
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AA seq
257 aa
AA seq
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MPEIPDLNIFVKNLSKRLVGKRLSNVVVLITRQLKVSSDDLAKALEGHILVGIERVGKEL
HFKFNNGTVLGIHLMLHGTLYWFEEKNENKFSIAELHFGKNLGLAITDWQKAVMLKLNPD
PVKVPDALDVKAKYLETACAKTSHYIKTVLTDGKTVGGIGNAYVDEILYDAQISPFSKAD
KLPPKAIMAIAKSIKSVLKKAEDHIEGNFPDTISEKERDFLQVHRPKQAKTLSGEDILKA
EIDKRKTYYTASQKLFE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgccggaaatacctgatttaaacatattcgttaagaacctctcaaaaaggctcgtaggc
aaacgattgtccaacgtagtagtgctgattactaggcaacttaaagtatcctcggacgac
ctagcaaaagcgcttgagggacacatattggtagggattgagcgggttggcaaagagctc
catttcaaatttaacaatggtactgttctcggtatccatttgatgttgcatggtacgctc
tattggttcgaagaaaaaaacgaaaataagtttagcattgcagaacttcatttcggcaaa
aatctaggattagcaatcactgactggcaaaaagcggttatgcttaaactcaacccggat
cctgttaaggtgcccgacgcactcgatgttaaagcaaaatacttggagaccgcttgtgct
aaaacctcccactacattaagactgtattaacagacggtaaaactgttggcggtattgga
aatgcttatgtggacgagatcttgtatgatgcccaaatatcgcccttttcaaaagctgac
aagctgccgccaaaagcaataatggccattgcaaagtctataaaatctgttttaaaaaag
gctgaagatcatattgaaggcaactttccagatacgataagtgaaaaggagcgagatttt
cttcaagtacaccggccaaagcaagccaagactttatccggtgaggacatattaaaggcc
gagatcgataagcggaaaacctattatacggcatcccagaaactttttgaataa
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