Mucilaginibacter ginkgonis: GO620_001425
Help
Entry
GO620_001425 CDS
T07235
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mgik
Mucilaginibacter ginkgonis
Pathway
mgik03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mgik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GO620_001425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgik03400
]
GO620_001425
Enzymes [BR:
mgik01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GO620_001425
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GO620_001425
DNA repair and recombination proteins [BR:
mgik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GO620_001425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
NFACT_N
Ribosomal_S13
DUF4438
Motif
Other DBs
NCBI-ProteinID:
QQL50139
UniProt:
A0A6I4HZ40
LinkDB
All DBs
Position
309425..310198
Genome browser
AA seq
257 aa
AA seq
DB search
MPEIPDLNVFQKNLAKKLVGKKLEKIEFLITRQLKIPASAFQETLQGTKLKEVVRIGKEL
HFEFQNGHVLGLHLMLHGALHWFEVKNDNRFTIAELYFNNGTGLAITDWQKAVMLKLDPE
LSSAPDALKVTSRYFEATLKMSSRPIKTVLVEGKTVQGIGNAYADEILYAAGISPFSAAD
KLTSEAIATLTKSIKSVLKEAEKHIERNFPDTISEKERDFLQVHRPKQKVTLAGEKILRA
DIDKRKTYYTVKQHVFE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaattcccgatcttaatgttttccaaaagaatcttgcaaaaaagcttgtaggt
aaaaaacttgagaagattgaatttctcataaccaggcaacttaagattccggcttctgcc
tttcaggagacgctacagggcacaaagttgaaggaagtcgtaagaatcggcaaggaattg
cattttgaatttcaaaatggccatgtgctaggactgcatttaatgcttcatggagcactg
cattggtttgaggttaaaaacgacaaccgttttacaatagcagaattatattttaataat
ggaacaggtcttgccataaccgattggcaaaaggcagtaatgctaaaacttgatcctgag
ctttcgtcggcgcctgatgcattaaaagtaacatcgagatatttcgaggcgacgttaaaa
atgagttctcgtcctattaaaactgttttagtggaaggaaaaacggttcaaggaataggc
aatgcatatgcggatgaaattctttacgcagctggtatttcgcccttttcggctgcggat
aaattaacttcagaagcaatcgcaactttaacaaagtccattaaatcagttttgaaagaa
gcagaaaaacacattgagcgcaatttccccgatacgataagcgagaaagagcgggatttt
ttgcaggtccaccgcccaaagcaaaaggttacactggcaggtgaaaaaattttaagggct
gacattgataagcggaaaacttattacactgtaaagcagcatgtttttgaataa
DBGET
integrated database retrieval system
