Mucilaginibacter ginkgonis: GO620_004230
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Entry
GO620_004230 CDS
T07235
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mgik
Mucilaginibacter ginkgonis
Pathway
mgik03420
Nucleotide excision repair
mgik03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GO620_004230
03430 Mismatch repair
GO620_004230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgik03400
]
GO620_004230
Enzymes [BR:
mgik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GO620_004230
DNA repair and recombination proteins [BR:
mgik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GO620_004230
MMR (mismatch excision repair)
Other MMR factors
GO620_004230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
ResIII
AAA_11
DEAD
DUF4859
Motif
Other DBs
NCBI-ProteinID:
QQL50674
UniProt:
A0A6I4I1L0
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Position
complement(923560..925833)
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AA seq
757 aa
AA seq
DB search
MDYLEGLNPEQKGAVLQTKGPVMIIAGAGSGKTRVITYRVAHLIKQGVDSFNILVLTFTN
KAAREMRDRITQVVGPEAKNLWMGTFHSVFAKLLRVEAAKIGYPSNFTIYDTDDSKSVLR
AILKEMNLDDKLYNANFVYNRISAAKNNLVGPAEYSSNEQIQADDFSQGRGHLGKVYETY
AARCYRAGAMDFDDLLYKTNELLKDHPETLYKYQNKFKYLMVDEYQDTNFSQYLIVKKLA
AINENICVVGDDAQSIYAFRGANIQNILNFEKDYPDLKIFKLEQNYRSTQNIVNVANSII
ANNKEQLKKNVFSQKESGDKIKVMRAFSDNEEGKMVAEGIWADQTGRGLKWNDFAILYRT
NAQSRSMEEALRKLNIPYKIYGGLSFYQRKEIKDLIAYFRLTFNPNDEEALKRVINYPRR
GIGDTTVDRIILSADQNGITPFEVVINPSRYLDGRSSTAVGNFGTMIQSFQVITKTLSAY
DAALHIAQHSGLLKDLYEDKSVEGLNRYENIQELLNGIKEFSEREDIEEKGLDVFMQDVA
LLTNDDNDKNKDADTVSLMTIHSSKGLEFKQVNVVGLEENLFPSQMSLNSRSDLEEERRL
FYVAVTRAESKLTISYATSRFKFGTLISCEPSRFLDEIDAQYLELDFTAKPAPTANPFFD
DDRKAWSRNTDSFSKPKPAAVKTTSILAKAHVPSEGFAPSDTSKLQVGMEVEHERFGYGK
VQVLEGYKPDVKATIFFKEIGQKQLLLKFAKLRIVED
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
ttggattatttagagggtttaaaccctgaacaaaagggcgcggtattacaaactaaaggt
ccggtaatgatcattgccggtgcgggatcgggtaaaacgcgggtaattacttatcgcgtg
gcgcaccttataaaacaaggtgtggattcttttaacatactggtattaacctttaccaat
aaggcagcccgcgaaatgcgcgaccgtatcacccaagtggtgggcccggaagctaaaaac
ctttggatgggtactttccactcagtttttgcaaagctgctgcgggtagaggccgccaag
atcggctatccaagcaactttaccatttacgatactgatgacagtaaaagcgttttaagg
gccattttaaaagagatgaaccttgacgacaagctctacaatgccaactttgtttacaac
cgtatatcggcggcgaaaaataatcttgttggcccggcagaatatagcagcaatgaacag
atccaggccgacgatttttcacaagggcgcgggcatttaggcaaggtttatgaaacttat
gcggcccgttgctaccgtgccggcgctatggattttgatgatctattgtacaaaactaac
gagcttttaaaagatcaccccgaaacactgtataagtaccagaacaagtttaaatacctg
atggtggatgagtaccaggataccaacttttcgcagtacctcatcgtaaaaaaactggct
gccattaacgagaatatttgtgtagtgggcgatgatgcgcaaagtatctacgccttccgc
ggcgccaacattcaaaacatcctgaacttcgagaaggattaccccgatctgaagatattt
aaactggagcaaaattaccggtctacgcagaacattgtaaacgttgccaacagcattatt
gccaataacaaagaacagcttaaaaagaatgttttctcccaaaaagaaagcggcgataag
ataaaggtgatgcgcgcctttagcgataacgaagaaggcaaaatggttgccgaaggtatt
tgggccgatcaaaccggccgcggactaaagtggaacgactttgccattttgtaccgcacc
aatgcgcagtcgcggtctatggaagaggccttgcgcaagctgaacattccgtataagatt
tatggtggcttgtcattctaccagcgcaaagagattaaagacctgatcgcttatttcagg
ttaacctttaacccaaatgatgaggaagccctaaaacgtgtgatcaattacccgcggcgc
ggtattggcgataccactgttgaccgcatcatactgagcgctgaccagaatggcattacc
cctttcgaggtagttattaatccgtcgagatatctcgatggccgcagttctacagcggtt
ggcaactttggtaccatgatccagagcttccaggtgatcaccaaaacgttatcggcttat
gacgctgctttgcacatcgcgcagcactcgggcttattaaaagacctgtacgaagataaa
tctgttgaaggcctaaaccgctatgagaacattcaggaattgctcaacggtatcaaagag
ttttctgaacgtgaggatatcgaggaaaaaggactggatgtatttatgcaggatgtagcc
ctgcttactaatgacgacaatgataaaaacaaggatgccgatacagtatcattaatgacc
atacatagcagcaagggcctggaatttaagcaagtaaatgttgttggtttagaagaaaac
ctttttccatcgcaaatgtcgctcaattcgcgcagcgaccttgaagaagagcgccggcta
ttttatgtggctgtaacccgggcggaaagcaagctcaccatcagctatgctacttcccgt
tttaaattcggcacgttgatcagctgcgaaccgagccgatttttggatgaaatagatgcc
caatacctcgagctggatttcacagccaagccggcgccaactgcaaatccattttttgat
gacgaccgtaaagcctggagccgcaacaccgatagcttctccaagcctaaacctgcggcg
gtaaaaactacgtctatcttagctaaggcacacgttccgtctgaaggctttgcaccttcc
gacacatcaaaactgcaagttggtatggaagtggagcatgaacgttttggctatggtaaa
gtgcaggtattagaaggctacaaacccgacgtaaaagcaaccatcttctttaaagaaata
ggccaaaagcaactgctgcttaagtttgccaagctgcggattgtggaagactaa
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