Mucilaginibacter ginkgonis: GO620_007970
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Entry
GO620_007970 CDS
T07235
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mgik
Mucilaginibacter ginkgonis
Brite
KEGG Orthology (KO) [BR:
mgik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgik03032
]
GO620_007970 (topA)
03400 DNA repair and recombination proteins [BR:
mgik03400
]
GO620_007970 (topA)
Enzymes [BR:
mgik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GO620_007970 (topA)
DNA replication proteins [BR:
mgik03032
]
Prokaryotic type
DNA Topoisomerases
GO620_007970 (topA)
DNA repair and recombination proteins [BR:
mgik03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GO620_007970 (topA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
DUF7646
SCIMP
Motif
Other DBs
NCBI-ProteinID:
QQL51368
UniProt:
A0A6I4HX76
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All DBs
Position
1721828..1724260
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AA seq
810 aa
AA seq
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MAKNLLIVESPAKAKTIEGYLGKDFVVKSSYGHIRDLVKSEDAIDIAHDFQQKYEVPADK
KQVVSELKKLAKEAEVIWLASDEDREGEAISWHLFETLGLKEANTRRIVFHEITKPAIIR
AIENPRTINYHLVNAQQARRVLDRLVGFELSPVLWKKVKPSLSAGRVQSVAVRLIVDRER
EINKFQSEAAFRVTAIFGKGREAFKAELNERFAKQEDAEKFLNDCIGADFNVKSLDTRPA
KRSPAAPFTTSTLQQEASRKLGFSVSRTMSVAQKLYESGRITYMRTDSVNLSDTALNAAA
SEIVSAYGQQYHQQRQYKTKSASAQEAHEAIRPTYFNVHSFEGDNAEKRLYELIWKRAIA
SQMSEAQFERTVARISVSTRPEELVANGEVMKFDGFLKVYLESTDEDEKEDNIEEGDSAI
LPPLTKGQLLSLTEMTAVERYSRPPARYTEASLVKKLEELGIGRPSTYAPTISTIQNRGY
VVKEEREGKTRAYRVLTLKNSSIAKEEKTEITGADKNKMFPTDIGAVVNDFLVQHFNGIV
DYHFTAGVEKQFDEIAQGLQEWTVMIRKFYDPFHQEVETTKATADRASGERELGVHPESG
KKLSVRIGRYGPFVQIGEADDEQKQYASLRAGQMIETISLEEALELFKLPKKVGLFEEKE
MTVAIGKFGPYIRHNSAFYSLPKGIDPLDVAEDQAIEIILDKRKRDAERLIKTFDENPEV
KILNGRWGPYIEFEKLNVKIPKDKDPHTLTFDEVKALADATAAEPKKGRFGKVIAAKAAP
AAKKATTAKKQAAKKSPAKNAPAKKSTGKK
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatttactgatcgtagaatcaccggcgaaggccaaaactatagaaggatat
ctgggcaaagactttgttgtaaagtcgagttatggccatatccgcgatctggtaaagtct
gaagatgccatagatatcgctcatgattttcaacagaaatatgaagtacctgccgataaa
aaacaggtagtgagcgagttaaaaaaattagcaaaagaggcagaggtgatatggctcgca
tccgatgaggaccgtgagggggaagccatatcatggcatttgtttgagacacttgggctt
aaagaagctaatacccgccggattgtatttcacgagattacaaagccggccatcatacgc
gcaattgaaaatccgcgcaccattaactaccatttggtaaatgcccagcaggcacgcagg
gttttagaccgtttggtgggttttgagctttcgcccgttttgtggaagaaagttaaaccg
tctttatcagccggtcgtgtgcaatctgttgccgtgagattgatcgtagaccgcgagcgc
gagatcaacaaatttcagtctgaagccgccttccgtgtaactgccatttttggtaaaggc
cgtgaggcatttaaagccgaactgaatgagcgtttcgcaaagcaagaggatgccgaaaag
ttcctgaacgattgtataggtgctgatttcaatgtcaagtctctggatacacgcccggca
aaacgttcgccggctgcgccattcactacctcaaccctgcagcaagaagccagccgcaaa
cttggcttttctgtatcgaggacgatgtctgtagcacagaaactttatgaatcgggccgt
atcacatatatgcgtaccgattctgttaacttgtcggacacagcgttaaatgctgccgca
agcgaaatcgtttcggcttacggacagcaatatcatcagcaaaggcaatataaaactaaa
tcggccagcgcgcaggaggcgcacgaagccatccgtccaacttacttcaatgtccacagt
tttgagggcgataacgcggaaaaacgtttgtacgaactgatttggaaacgcgccatcgca
tcgcaaatgagcgaagctcaatttgagcgtaccgttgcacgaatcagcgtatctacccgc
ccggaagaacttgtggcgaacggtgaggtgatgaaatttgatggcttcctgaaggtttat
ctggagtctactgacgaggacgaaaaggaagacaatattgaagaaggcgacagcgccata
ctgccaccgttaaccaaagggcaattattatcattaacagaaatgacggcggtggagcgt
tactcacgtcccccggcaagatacacggaagcaagcctggtaaaaaaactggaggaactg
ggcattggcaggccgtctacctatgcccctaccatttctactatccaaaaccgcggatat
gtggttaaagaagagcgcgaaggcaaaacacgcgcctaccgtgtactaaccttaaagaac
agcagcatagctaaagaagaaaagaccgaaataacaggagccgataagaacaaaatgttc
ccgaccgacattggcgcggtagtgaacgattttctggtgcagcattttaatggtattgtc
gactatcattttaccgcaggtgttgagaagcagttcgacgaaattgcacagggcttgcag
gaatggacggttatgatccgcaagttttacgacccgtttcatcaggaagtagaaaccacc
aaagcaaccgctgaccgcgccagcggggagcgcgaattaggcgttcaccccgaaagcggc
aaaaagctttcagttcgtatcggccgttacgggccctttgtgcaaatcggcgaagcggac
gatgagcagaaacaatatgccagcctgcgtgcgggccagatgatagaaacaatcagcctt
gaggaggcattggaactattcaagttgcctaaaaaagttggcctgtttgaagaaaaggag
atgaccgtagctatcggcaaattcggaccttacatacgccataatagtgcgttctattcg
cttcctaaaggtatagatccgttagacgttgcagaagatcaggcaattgagattattctt
gataaacgcaagcgtgatgcagaaagattgatcaaaaccttcgatgaaaatcccgaggta
aagatccttaatggccgctggggaccatacatagaatttgaaaaactgaacgttaaaatt
cctaaagataaagacccgcatacgcttactttcgatgaggtgaaagcgcttgcagatgct
accgccgccgaacctaaaaaaggacgatttggcaaagtgatagctgcaaaagctgctccg
gcagcaaaaaaagcaactacggcgaagaagcaagccgcgaaaaaatcgccggctaagaat
gcgccggctaagaaatccacaggtaagaaataa
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