Mucilaginibacter ginkgonis: GO620_008940
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Entry
GO620_008940 CDS
T07235
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mgik
Mucilaginibacter ginkgonis
Brite
KEGG Orthology (KO) [BR:
mgik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mgik03016
]
GO620_008940 (truB)
Enzymes [BR:
mgik01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GO620_008940 (truB)
Transfer RNA biogenesis [BR:
mgik03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GO620_008940 (truB)
Prokaryotic type
GO620_008940 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
DUF559
TruB_C_2
MTES_1575
Vsr
Motif
Other DBs
NCBI-ProteinID:
QQL48321
UniProt:
A0A6I4I0V7
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All DBs
Position
complement(1930038..1931333)
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AA seq
431 aa
AA seq
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MSTSENTLQSFADGKLLLINKPYKWTSFDVVGKLRNAFKPLKLKVGHAGTLDPLATGLLI
VCTGKMTKQIDTFQAEEKEYTGTLILGATTPSYDMETEVDERFDTSGITADDIENVAKQF
IGAIQQYPPAHSAIKVGGERLYEKARRGEEVELKSRTVTISEFEITNIEMPEVQFRVICS
KGTYIRSLVYDFGRALNNGAYLSKLRRTRSGSFRIENAREIMEMVGEIRALKEKNINAGS
LPHLSPPREGGFENPESVDDKLPHPNPPPMGGLTPSDKVSGYRENADAANYETLKAFSRS
NRHQPTEAENVLWQLLRGNTTGFKIRRQHVIGNYIADFVCLQKMLVFEVDGEYHKFTSEA
DDLRTEILSDLGFEIVRIKNADVLISPDKVFNFIVTKINNTPQRKALPSGEGLGGADFND
DAISHSEEVQP
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
ttgtctacttcagaaaatacactacagagctttgccgacggcaaattgctcctaataaac
aagccgtacaaatggaccagtttcgatgtggtgggaaagctacgaaacgcattcaagcca
ttgaaattaaaggtcggccatgcgggtacattagatccgttggctaccggtttacttatt
gtttgcaccggcaaaatgaccaagcaaatagatacgttccaagccgaagagaaagagtac
accggcacccttatccttggcgcaacaacgccgtcttatgacatggaaaccgaggtcgat
gagcgttttgatacatctggcatcacagcggacgacattgaaaatgtggcaaagcaattt
atcggcgcaatacaacaatatccgcctgctcattctgccataaaagtagggggtgagcgc
ttgtatgaaaaagcccgccgtggcgaagaagtcgaactaaaatctcgaacggttaccatc
tcagagttcgagatcaccaacattgagatgccggaggtgcagtttagagtgatatgcagt
aaaggaacttacatccgctcgttggtctatgattttggccgcgcgctaaataacggtgcc
tatctttctaaacttcgccgcacccgcagcggtagctttagaattgaaaacgcgagggag
atcatggaaatggttggagagattcgggcattgaaagaaaaaaatatcaacgcaggatca
ttgccccacctaagccctccccgggagggagggtttgaaaatccggaaagtgttgatgac
aaattgccccacccaaaccctcccccgatgggagggcttacgccatctgataaggttagt
ggttatagagaaaatgctgatgcggcaaactacgagaccttaaaagcttttagccgttca
aacaggcatcagcccactgaagccgaaaacgttttatggcaattattaagaggcaacacc
acagggtttaaaatcagacggcaacacgttattggaaattacattgctgattttgtttgt
ttgcaaaagatgcttgtttttgaggtcgatggggagtatcataaattcacctcagaagct
gacgatttaagaactgaaattttaagcgatcttgggttcgaaatagtccgaattaagaac
gcagatgttctgatatctcctgataaggtgtttaattttatagtgactaaaataaataac
acacctcaaagaaaagccctcccatcgggggagggtttgggtggggcggattttaatgac
gatgccattagtcacagtgaggaggttcaaccatga
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