Mucilaginibacter ginkgonis: GO620_009925
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Entry
GO620_009925 CDS
T07235
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mgik
Mucilaginibacter ginkgonis
Pathway
mgik03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mgik00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GO620_009925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgik03021
]
GO620_009925
03400 DNA repair and recombination proteins [BR:
mgik03400
]
GO620_009925
Enzymes [BR:
mgik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GO620_009925
Transcription machinery [BR:
mgik03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GO620_009925
DNA repair and recombination proteins [BR:
mgik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GO620_009925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QQL48508
UniProt:
A0A6I4I5Q5
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All DBs
Position
complement(2128166..2129158)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILAFQKPDKVIMQKSTDFDGTFEFRPLEPGFGITIGNALRRILLSSLEGYAITSVRLS
GVSHEFSTIKGVVEDVTEIILNLKQVRFKKTGTSGDSEKIFVIINGQDSFKAGDITKFSN
NFTVLNPELVIANMDSSVTLEVELTVNKGRGYVASEENKNPDALVGVIAIDSIYTPIKNV
KYTIENYRVEQKTDYEKLVLDIVTDGSVHPEHALKEAAKILIQHFMLFSDENMMLEAQAK
EETKEVDEEILHMRKILKTELVDLDLSVRALNCLKAADIRSLADLVSYDVADMLKFRNFG
KKSLTEIQDLVKSKGLSFGMNLAKFKLDEE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttagcattccaaaaaccagacaaggttattatgcaaaagtcaaccgacttt
gacggtacgtttgaatttcgtccgttagagccgggtttcggtattaccattggtaatgct
ttacgtcgtattctgctttcatcattagagggttatgccattacatctgtacgtttatca
ggtgtatcgcacgagttctcgaccattaaaggtgttgttgaggatgttaccgaaattatc
cttaaccttaaacaggtacgtttcaaaaaaaccggtacctctggcgactctgagaagatc
tttgtgatcatcaacggtcaggatagctttaaagccggtgatatcaccaagttttctaac
aacttcactgttcttaacccggagttggttatcgcgaacatggactcatctgtaacttta
gaagtagagctaacagtgaataagggccgtggttatgtagccagcgaagaaaacaagaac
cctgatgctttggtaggtgttatcgcgatagattctatctacacgccgatcaaaaacgta
aaatacactatcgagaattatcgtgttgagcaaaagactgactacgagaaattggttctt
gatatcgtaacagacggttctgtacatcctgaacatgctttgaaagaagctgctaagatt
ttgatacagcactttatgttattctctgacgagaacatgatgcttgaagcacaagctaaa
gaagaaactaaagaagttgacgaggaaatcttacatatgcgtaagatccttaaaactgag
ctagttgatcttgacctttctgtacgtgctttgaattgcttgaaagctgcagacatccgc
agcctggcagatcttgtttcttatgatgttgctgacatgttaaaattcaggaactttggt
aagaaatctcttacagagatacaagacctggttaaatcaaaaggcttatcttttggtatg
aacctggcaaagtttaaacttgacgaagaataa
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