Mucilaginibacter ginkgonis: GO620_010775
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Entry
GO620_010775 CDS
T07235
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mgik
Mucilaginibacter ginkgonis
Pathway
mgik03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mgik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GO620_010775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgik03400
]
GO620_010775
Enzymes [BR:
mgik01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GO620_010775
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GO620_010775
DNA repair and recombination proteins [BR:
mgik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GO620_010775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
QQL48663
UniProt:
A0A6I4HZ08
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All DBs
Position
complement(2305910..2306680)
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AA seq
256 aa
AA seq
DB search
MPELPDLQVFARNLDKKLGGKTLERITVNSKKAKTPNAEFAKALHGQKLKKVYRDGKELF
FDFDEHTLGLHLMLHGQLFRFDGKNEQKYTVVEMIFKGGEGLALTDWQGAANPTLDPEES
KAPDAFDKAVTPKWWQDSLGKKKSAIKNVLLDQKFIRGIGNAYADEILYDAGISPMSVAN
KIPADKVKVLAKSVKKVLEDAEKQITKSKPDIISGEVRDFLKVHHTRKGETDKGEKILVE
KGSRKTYYTEGQELYK
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagacctgcaggtatttgcacgcaatcttgataagaagcttggcggt
aaaacgctggagagaattactgtaaacagtaaaaaagcaaaaacgccaaatgcagagttt
gcaaaagcgttacatggccaaaaactaaaaaaggtttaccgggatgggaaggaactattt
ttcgatttcgacgagcacacgctgggtttgcatttgatgctgcacggccaattgtttcgg
ttcgacggaaagaatgaacaaaagtatacagttgtagaaatgatctttaaagggggagag
gggcttgcgctaaccgactggcagggcgcggctaacccaacgcttgacccggaggaaagt
aaagcgcccgacgcgttcgataaagcagtgacacctaagtggtggcaagatagtcttggg
aaaaaaaagtcggcaatcaagaacgtactcctcgaccaaaaatttattcgcggtattggt
aacgcgtatgcggatgaaatactttacgatgccggcatctcgccgatgtctgtcgctaat
aaaatacccgccgacaaggtgaaggtgctggcgaaatcagtcaagaaagtgctggaagat
gccgaaaaacaaatcaccaaatccaagcctgatatcatcagcggcgaggtgcgcgatttc
ttaaaggtgcatcatacccgtaagggtgaaaccgacaaaggcgaaaaaatactggtcgaa
aagggttcccggaaaacttactatacagaagggcaggagttatataaatag
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