Mucilaginibacter ginkgonis: GO620_013660
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Entry
GO620_013660 CDS
T07235
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
mgik
Mucilaginibacter ginkgonis
Pathway
mgik03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mgik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GO620_013660 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgik03400
]
GO620_013660 (uvrA)
DNA repair and recombination proteins [BR:
mgik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GO620_013660 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GO620_013660 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
SMC_N
UvrA_DNA-bind
AAA_21
nSTAND1
AAA_16
AAA_29
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
AAA_22
AAA_33
NACHT
ATPase
cobW
AAA_23
Viral_helicase1
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QQL49214
UniProt:
A0A6I4I2R5
LinkDB
All DBs
Position
complement(2936123..2938945)
Genome browser
AA seq
940 aa
AA seq
DB search
MSKAAAADPQQNIIIKGARVHNLKNIDVAIPKNKLVVITGMSGSGKSSLAFDTLYAEGQR
RYVESLSSYARQFLGRMNKPDVDYIKGIAPAIAIEQKVITSNPRSTVGTSTEIYDYLKLL
FSRIGHTLSPVSGQRVKRDSVTDVIKFLTGLPEDTSATILCPLHPHNNRSLKEELAVLMQ
KGFVRIENNSKVKRIENILEDTSVANDSLAEGQVRIVVDRISVGKDDETISRMGDSIQTA
FFEGRGDCYVRYPDAETGEETETFFCDRFELDGIKFEEPSPNFFSFNNPYGACKRCEGYG
KVIGIDEDLVIPDKSKTIYDGAIAPWRSEKMREWNDRLVKNAIKFDFPVHRAYNQLTEAE
KQLLWKGNQYFRGLDDFFEELETQTYKIQYRVILSRYRGKTTCPECKGSRLRKDASYVKI
YGKSITDIVLMPLDKALEFFNGLELNEHDEKIARRLLTEITNRLMFLNDVGLSYLTLNRL
SNTLSGGESQRINLATSLGSSLVGSVYVLDEPSIGLHPRDTQRLITVLKSLRDVGNTVLV
VEHEEEIMQAADYLIDIGPEAGTHGGEMIFAGTYDEIIADDDSLTGKYLSGKEQIEVPAH
RRKWNNSIVVKGARENNLQHVTAKFPLGVLTVVTGVSGSGKTSLVKRILHPALQKALGNY
SGEQTGSYDEITGDYSLIEAVEMVDQNPIGRSSRSNPVTYVKAWDEIRNLYAAQPAAKAN
GLKPSAFSFNVEGGRCDVCQGEGEVKIEMQFMADIFLPCESCGGKRFKQNILEVTYQEKN
VADVLEMTIDNALEFFKKESKILNKLKPLVDVGLGYVQLGQSSNTLSGGEAQRIKLASFL
IKGNNTSKTLFIFDEPTTGLHFADIKKLLKSFDALLDQGNTIIVIEHNMDVIKSADWVID
IGPEGGDRGGNLVFEGLPEDLVKKENSYTGKFLKERLSVK
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagccgcagcagcagatccgcaacaaaatatcatcattaaaggtgcccgtgtg
cacaaccttaagaatattgatgtcgctattcctaagaacaaactcgtggttattacgggc
atgtcgggctcgggcaaatcatccctggcgtttgacacgctgtatgccgaaggccagcgc
cggtatgtagaaagtttgtcatcatacgcccgccagtttttgggccgcatgaacaagccc
gatgttgactatattaaaggcattgcacctgccattgcgatcgagcaaaaagtaattaca
tccaacccgcggtctacagtcggcacgtctacagagatatatgactatttaaagctgcta
ttttccaggatcggccacacgctgtctcctgtatccggtcagcgggtaaagcgcgattcg
gtcactgacgtgatcaaatttctaactggtttgcctgaagatacctccgctacgatactt
tgtccgctgcatccgcataacaaccgctctttaaaagaagaattggcggtgctgatgcag
aaagggtttgtgcgtatagaaaacaacagcaaagttaagcgtatagaaaatattcttgag
gatacatctgtcgcgaatgattcgctcgctgaagggcaggtacgcattgttgtcgaccgt
atttctgtggggaaggatgatgagaccataagtaggatgggcgactccatacaaaccgca
ttttttgaaggccgcggcgattgttacgtacgttatccggatgctgaaacaggcgaagaa
acagaaacgtttttctgtgaccgctttgagcttgacgggatcaaatttgaagaaccgtcg
cccaacttctttagcttcaataatccatatggtgcttgtaagcgctgcgaaggttatggt
aaggtaatagggatcgatgaagacttggtcattcctgataaaagtaagactatttatgac
ggtgccatagccccatggcgcagcgagaaaatgcgcgagtggaatgaccggctggtaaaa
aacgctatcaagtttgattttcctgttcaccgggcatataaccagctgactgaagccgag
aagcaattattgtggaaaggcaaccaatacttccgcgggctcgacgactttttcgaggaa
ctggaaacccaaacctataaaatacaataccgggtgattctttcgcgctatcgcggtaaa
accacctgccccgagtgtaagggaagccgattgcgcaaggatgcttcttatgtaaagatc
tacggtaaatcgattacggacattgtgctgatgccgctcgacaaagcccttgaatttttc
aacgggctggagttaaatgagcatgatgaaaagatagcccgccgtttgctaacggagatc
accaaccggttaatgtttttgaatgatgttggcttaagctacctaacattaaaccgtttg
tcgaatactttatcgggcggtgagtcgcaacgcattaacctggcaacatcgttaggcagt
agtttggtcggttcggtgtatgtactggatgaaccaagtatcggccttcatccgcgtgat
acacaaagattgatcactgttttaaaatcgctgcgcgatgtgggcaacacagttttggtg
gtagagcatgaagaagaaattatgcaggcagccgattacctgattgacattggcccggaa
gcaggcacacacggtggcgaaatgatatttgccggaacttatgatgagatcattgccgat
gacgatagtcttaccggtaaatacctgagtggtaaggaacagatagaagtacctgcgcac
cgccgcaagtggaataattccatcgtagtgaaaggcgcacgcgaaaacaacctgcagcat
gttactgctaaatttcctttaggtgtgctcaccgtcgttactggcgtttccggttcgggt
aaaacaagtttggtaaaacgcattttacacccggcattgcaaaaggcattgggcaattac
agcggcgaacaaacaggttcatacgacgagatcaccggcgactattcattaattgaagcg
gttgaaatggtagaccaaaatccaatcggccgttcttcgcgctcgaatcctgttacctac
gttaaagcttgggacgagatacgcaacttatatgccgctcagcccgctgcaaaagcgaac
gggcttaagccatcagctttttcatttaatgtagagggtggccgctgtgatgtttgccag
ggtgaaggtgaggtaaagattgagatgcaatttatggcagatatttttctgccatgcgaa
tcgtgcggaggtaaacgctttaagcagaatatcctcgaagttacttaccaggaaaagaac
gtagccgacgtattagaaatgaccatcgataacgcgcttgaattctttaaaaaagaatct
aaaatattaaacaagcttaagccattggtcgatgttgggttgggttacgtacaattaggg
caatcgtcaaatacattatcaggcggcgaggcacagcggatcaagttggcatctttcctg
ataaaaggtaacaataccagcaaaacccttttcattttcgacgagccgactaccggcctc
cacttcgcggatattaagaaattgctcaaatctttcgatgcattgcttgaccagggcaat
accattattgttatagagcacaacatggacgtgatcaaaagcgcagactgggtgatagac
attggccctgagggtggcgaccgcggaggtaacctggtgtttgaaggcctgcccgaagat
ttggtgaaaaaagaaaattcctatacaggcaagtttttgaaggagcggcttagcgttaaa
taa
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