Mucilaginibacter ginkgonis: GO620_014955
Help
Entry
GO620_014955 CDS
T07235
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mgik
Mucilaginibacter ginkgonis
Pathway
mgik03420
Nucleotide excision repair
mgik03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GO620_014955
03430 Mismatch repair
GO620_014955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgik03400
]
GO620_014955
Enzymes [BR:
mgik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GO620_014955
DNA repair and recombination proteins [BR:
mgik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GO620_014955
MMR (mismatch excision repair)
Other MMR factors
GO620_014955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
DUF1722
GHMP_kinases_N
Dna2
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QQL49453
UniProt:
A0A6I4HZS3
LinkDB
All DBs
Position
3219051..3222212
Genome browser
AA seq
1053 aa
AA seq
DB search
MNLSPAERYNAKFKEILDGLNPEQLEAVNKTDGPVMVVAGPGTGKTQILAARIGKILLDT
DARADEILCLTYTDAGAVAMRKRLFEFIGPEAYRIGIYTFHAFCNEVIQENLDYFGRNNL
EPLTDLEAAMLFRELVDDFANDHLLKRFTGDRYYDAPRLKRLFSTIKTENWSEEHIRQAV
KEYLEDLPNREEFVYKRPNPKQGIKVGDPKQKDIDKAADAMAKLLAAVGEYPNYEAKMKR
DDRYDYDDMILWVLRAFRENTDLLRRYQERYQYILVDEYQDTSGSQNTLLKHLLDYWDTP
NVFIVGDDDQSVYRFQGANMKNIMDFANDYQRVLKTVVLKDNYRSNQSILDISKILIDNN
QERLTRQLKLNKNLKASHPRFDSLAAEPEIREYENVDHELVDVGNQIERLIQNGVAPGEI
AVIYRNHNQAEELIHYLDMQKIAVNTKRKIDILTLPFGEKIITILSYLAKEFDSPYSGDD
LLFEIMHYDFFEISPIDIARASIAVSKENYGVAEGKQKTSIRRYVADMSGPKQQPGLFDA
VQNAGMKQLVQDIEELLKAAASLSLQQLFQQVITRLGILAYIMKQADKGWHMEVLNNLFN
FIKDEHRKKAGTRLKDIIATIELMKDNGIRLDLNQTIYSENGVNFLTAHGSKGLEFEYVF
LIGSNKRVWDSKGRNAGFVYPDTLMQAAADENAQREESRRLFYVALTRAKQHLYVSYPAK
DKKGKDLEASQFVGEILAQTHLKVQYPKVDADSLFRYFSTQFSEDDKPTVELIDKNYIAI
LLQNYTLSVSHLNNYLDCPLKFYFQNLIRVPSGLSASAAFGSAVHFALNRVFRKLKDNGD
EFPTTDEFLREFRWYMYRNNDLFTAEEFKLRLSYGEKILPDYYELHVPKWNKIAVTERTI
KNMAIEGVPVKGNLDKIEFVGNQVTIVDYKTGKFKYAREKLNRPDPDHPNGGDYWRQGVF
YKLLVDNDKTNDWYAVATMFEFIEPLSPGEYIQEKLVISPHDEELVKSQIKDTYQKIMNH
EFNIGCGKADCDWCRFVRTNFKQPDKILEVDEE
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgaacctatcgcccgctgaacgctacaacgccaaattcaaagaaattcttgacggactt
aatcctgaacagttagaggctgtaaataaaactgacgggcccgttatggtagtggccggt
ccgggcacgggtaaaacgcagatactggctgcacggattggcaaaattctgctggataca
gacgcgagggcagacgagatactatgtttgacatacaccgatgcgggggcggtggctatg
cgaaaacgtctgtttgagttcatcggcccagaagcttaccgcataggcatctacaccttc
catgctttttgcaacgaagtgatacaggaaaacctggattattttggccgcaacaacctg
gagcccttaaccgatctggaggctgccatgcttttccgcgagttggtggacgatttcgcc
aacgatcacttgttaaaacgttttacaggcgaccggtactacgatgcgccgaggctgaag
cgtttgttctctaccattaaaacagaaaactggagcgaagaacatattaggcaggcggta
aaagaatatcttgaagacttgccgaaccgggaagaatttgtttataaacgccccaacccg
aagcagggcattaaggttggcgatccaaaacaaaaagatatagataaggctgcagatgct
atggctaaactgctagccgcggtaggggagtatcccaactacgaggccaagatgaaacgc
gatgaccgctatgattatgacgatatgatcttgtgggtgttgcgcgccttccgtgaaaat
acagacctgctgcgccgataccaggagcgctatcaatatattttggttgatgagtaccag
gataccagcggctcgcaaaatacattattgaagcatctgctggattattgggatacacct
aatgtttttattgttggcgacgacgaccagtcggtttaccgtttccagggtgctaacatg
aaaaacattatggactttgcaaatgactaccagcgtgtgttaaagaccgtagtgctaaaa
gataattaccgctccaatcagtcgatactggatatttccaaaatcctgatcgataacaat
caggagcgattaacccggcaacttaagctgaataaaaatcttaaagcatcgcatccgcgc
tttgacagtttagccgcagagccagaaatacgggaatatgaaaatgtagaccacgagtta
gtagatgtgggtaatcaaattgaacgccttatacaaaacggtgttgctccaggcgagata
gctgtcatataccgcaaccataaccaggcagaggagttgatccactacctggacatgcaa
aaaatagcggtaaatactaaacgaaaaatagatatactgacactgccttttggggaaaag
atcatcaccatactcagctacctggcaaaagagttcgactcgccttacagcggcgatgac
ctgttgtttgaaatcatgcattatgattttttcgagataagcccgattgatattgcccgc
gccagcattgccgtatcgaaagaaaattacggggttgccgagggtaaacaaaaaacatcc
atccgccgctatgtggcggatatgagcggcccaaaacagcagccgggcttgttcgacgca
gtacaaaacgcaggcatgaagcaattggtgcaggacattgaagagctacttaaggcggcc
gccagtttaagcctacagcaactgtttcaacaagtgatcacccggctgggtatcctggcc
tatatcatgaaacaagctgataaggggtggcacatggaggtgctgaataacctttttaat
tttattaaggacgaacaccgcaaaaaagccggcacaaggctgaaagatattatcgccacc
attgagttgatgaaggataacggcatcaggcttgatcttaatcaaaccatctattcagaa
aatggcgtaaatttccttaccgctcatggttccaaaggcctcgagtttgaatatgtgttt
ttgatcggcagcaacaaacgggtatgggacagcaaaggccgcaacgccggatttgtttat
cctgacacgttaatgcaggctgctgccgatgaaaacgcgcagcgtgaagaatcgcgcagg
ttgttttatgtagcgcttacgcgggctaaacagcacttgtacgtttcctatccggcaaaa
gataaaaaagggaaagacctggaagcgtcacaatttgtcggtgaaatattggcgcaaaca
caccttaaggtgcagtaccccaaggtagatgcagatagcttgtttaggtatttttcaaca
cagtttagcgaagatgataagccaaccgtagaacttatagataaaaactatatcgccatt
ctattacagaattatacgctatctgtttcccatctgaacaattacttggactgtccgctc
aaattttattttcagaatctgatacgtgtaccatccgggttgagtgcttcagccgcgttt
gggtcggcagtgcatttcgcattaaacagggtgtttagaaaattgaaagacaacggagac
gagttcccgacaacagatgaattcctgcgcgagtttcgctggtatatgtaccgcaacaat
gatctttttaccgccgaggaatttaagttgcgtttaagttatggtgaaaagatattgcct
gattattacgaattgcatgtgcctaaatggaataaaattgcagtgacagagcgcaccata
aaaaatatggctatagaaggcgtgcctgtaaaaggcaaccttgataaaatagaatttgta
ggcaaccaggtaaccatcgtggattataaaaccggaaagtttaaatacgcccgtgagaaa
ttaaaccgtcccgatccggatcatccaaacggcggagactactggcgccagggggtgttc
tataaattacttgtagataacgataaaaccaacgactggtatgctgttgcaaccatgttt
gaatttattgaaccgctgtcgccgggcgaatacatccaggaaaaattagtaattagtccg
catgacgaggaattggttaagtcgcaaataaaggatacgtatcaaaagattatgaatcat
gagtttaacatcggctgcggcaaagctgattgcgactggtgccgttttgtgcgcacaaac
ttcaagcagccggacaagatattagaagtagatgaagaatag
DBGET
integrated database retrieval system
