Mucilaginibacter ginsenosidivorans: FRZ54_02555
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Entry
FRZ54_02555 CDS
T06123
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
mgin
Mucilaginibacter ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:
mgin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgin03400
]
FRZ54_02555 (radA)
DNA repair and recombination proteins [BR:
mgin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FRZ54_02555 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
AAA
AAA_24
AAA_22
AAA_16
SLFN-g3_helicase
nSTAND3
NTPase_1
DEAD
AAA_14
ABC_tran
ATPase_2
AAA_5
KTI12
NACHT
GvpD_P-loop
Rad51
AAA_7
NPHP3_N
DZR
Isochorismatase
Motif
Other DBs
NCBI-ProteinID:
QEC61509
UniProt:
A0A5B8URB6
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Position
541710..543176
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AA seq
488 aa
AA seq
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MAKTKVAYFCQSCGFESPKWLGKCPSCQHWNTFAEEIIEKENKSIPNWKTPSTSMQRANK
PIQVSDISFDEDQRILTPDNEFNRVLGGGIVAGSLVLIGGEPGIGKSTLMLQLALNMPSM
KVLYVSGEESERQIKMRAERLVQSEVRSRKSEVDNVKSEIENSKFEIGSECYILTETSTQ
NIFKQIEQLEPDMVVIDSIQTLYSSHIESTPGSVSQVRECTAELLRFAKESGTPVFLIGH
ITKDGMIAGPKILEHMVDTVLQFEGDRHHVYRILRAVKNRFGSASELGIYEMLGEGLREV
SNPSEILLSQRDEPLSGITISATLEGMRPMLIETQALVSTSAYGTPQRTATGFDTKRMNM
LLAVLEKRCGFKLGGKDVFLNITGGISVEDPAIDLGLAAAIISSHEDIPIPFKTCFAGEI
GLSGEVRAVNRIEQRIAEAQKLGFEQIFISKYNLESGGQNKKRIDLTRYNIAVKTVGSIE
EVFSALFG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
ttggccaaaactaaagttgcttatttctgccagagctgtggcttcgaatcgcctaaatgg
ctgggtaaatgcccgtcgtgccagcactggaacacctttgccgaagaaataattgagaag
gaaaacaaatccatccccaattggaaaacaccttccacttccatgcagcgtgccaataaa
cccatacaggtatccgatatcagttttgacgaagatcagcggatactcacgcccgacaac
gagtttaaccgcgtactgggtggcggtattgtagccggttcgttggtattgataggcggc
gaaccgggcatcggtaaatcgaccctgatgctgcaactggcgctgaatatgccatccatg
aaagtgctttatgtgtcgggcgaagaaagtgagcggcagatcaaaatgcgggcggaacga
ttggtgcagtcagaagtcagaagtcggaagtcagaagtcgataacgtcaaatccgaaatt
gaaaattcgaaattcgaaataggatcagaatgttatatattaaccgaaacatctacccaa
aatatattcaagcagatagaacaactggaacctgatatggtggttatcgattcgatacag
acgctgtattcttcccatatcgaatcgacacccgggagcgtgtcgcaggtacgggaatgt
accgccgaattgcttcgttttgccaaagaatcgggcacgccggtattcctgatcgggcac
atcacgaaggacggcatgatagccggaccaaaaatactggagcacatggtagataccgtt
ctgcaattcgagggcgacaggcaccatgtttaccgtatcctgcgcgctgtgaaaaaccgt
ttcggttcggcatccgaactgggtatttatgaaatgctgggcgaaggcctgcgcgaagta
tccaacccatcagagatattgctctcgcagcgcgacgagccattgagcggcatcaccatt
tcggctacgctggaaggaatgcggccgatgctgatagaaacgcaggcattggttagtacg
tcagcctatggcacccctcagcgtaccgctacgggctttgataccaagcgcatgaacatg
ttgctagctgtgctcgaaaagcgttgcggcttcaaattggggggtaaggacgtctttttg
aatatcacaggcggtatcagtgtggaggaccctgccatcgacctcggcctggccgcggct
atcatctcgtcgcacgaggatatccctatccccttcaaaacttgctttgcgggcgagatc
ggcttatcgggcgaggtacgagcggtgaaccgtatcgaacagcgtattgccgaggcccaa
aagcttggcttcgagcagatatttatttcgaaatacaacctggaatcgggcggacaaaat
aaaaagcgcatcgatttgacgcgctacaatattgccgttaaaactgtaggcagtattgag
gaggtcttcagcgcattatttggctga
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