Mucilaginibacter ginsenosidivorans: FRZ54_09980
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Entry
FRZ54_09980 CDS
T06123
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mgin
Mucilaginibacter ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:
mgin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mgin03009
]
FRZ54_09980 (rimO)
Enzymes [BR:
mgin01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FRZ54_09980 (rimO)
Ribosome biogenesis [BR:
mgin03009
]
Prokaryotic type
ribosomal protein modification factors
FRZ54_09980 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QEC62892
UniProt:
A0A5B8UVD5
LinkDB
All DBs
Position
2188256..2189581
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AA seq
441 aa
AA seq
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MKTNNKKSVESPQRINVVTLGCSKNIYDSEVLMGQLKGNRFDVVHEAEAGKNDIVVINTC
GFIDNAKQESIDTILQYSELKEQGKIGKVIVTGCLSERYKPELEAEITNVDSWFGTNDLQ
NLLHSVGANYKHELIGERLLTTPTHFAYFKIAEGCNRPCSFCAIPLMRGKHVSKPMDELV
NEAKNLAKNGTKELILIAQDLTYYGLDIYGKRNLDELLRRLSDVDGIEWIRLQYAYPSGF
PMEILDAMNERDNICKYLDMPLQHITDNMLKSMRRGITKQKTIDLVDQIRDKVPGIAMRT
TLITGYPGETEQDFEEMQQWVAETRFDRLGCFTYSHEEKTSAYNLIDDVPDEVKQERADI
IMEIQQGISFEKNQEKVGKTYKVLIDKKDGGYFVGRTEYDSPEVDNEVLIAADKHYATAG
SFVNVKIDSAEDFDLYGQIVK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaataataagaaatcggtggaatcaccgcaacgaataaacgtagtcactctt
ggttgctcaaaaaacatctatgactctgaagtattgatgggtcagctgaaaggtaaccgg
ttcgatgtggtgcatgaagctgaagcgggtaagaatgatatcgttgtcatcaatacctgc
ggatttatcgacaatgcaaaacaggaatctatagatactatcctgcaatacagcgagctg
aaggagcaagggaagataggcaaggtgatcgttaccggttgcctttccgagcgttacaag
cctgaactggaagccgagatcaccaatgtcgattcgtggtttggtaccaatgaccttcag
aacctgctgcattcggtaggggcaaattataaacacgaactgataggcgaacgcctgctg
accactccaacgcattttgcctactttaagattgccgagggctgtaaccggccatgctcg
ttttgcgccataccgctgatgcggggcaagcacgtaagcaagccgatggatgaactggtt
aatgaagcgaaaaatcttgccaaaaacggcaccaaagaactcattttaatcgcccaagac
ctcacctattatgggctggatatttatggcaagcgcaacctggatgaactattgcggcga
ttatccgatgtagatggcattgaatggatacgcctgcaatatgcttatccttccggtttc
ccgatggagatactggacgctatgaacgagcgcgacaatatttgtaaatacctggatatg
ccgctacagcacataaccgataatatgctaaagtcgatgcgccgcggaataaccaaacaa
aaaaccatcgacctggtggaccagataagggataaggtgccgggcattgccatgcgaact
acgctcataaccggttaccccggcgaaacggaacaggattttgaggaaatgcagcaatgg
gtggccgaaacgcgtttcgaccggttaggatgctttacctactcgcacgaggaaaagacc
agcgcatacaaccttattgatgatgtgcccgatgaagtaaaacaggaaagagcggatatt
attatggaaattcagcagggaatttctttcgaaaagaaccaggaaaaggtcggtaaaacc
tataaagtgcttattgataaaaaggatggcggctattttgttggtcgcaccgaatacgac
tctcccgaagttgataacgaagttttaatagccgcagacaagcattacgccaccgcaggc
agttttgtcaacgtgaagatagacagcgccgaggacttcgatctttatggacaaattgta
aaataa
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