Mucilaginibacter ginsenosidivorans: FRZ54_14885
Help
Entry
FRZ54_14885 CDS
T06123
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
mgin
Mucilaginibacter ginsenosidivorans
Pathway
mgin02020
Two-component system
mgin02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mgin00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FRZ54_14885 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FRZ54_14885 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgin03021
]
FRZ54_14885 (rpoN)
Transcription machinery [BR:
mgin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FRZ54_14885 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
GET4
LacI
MarR
HTH_IclR
NES_C_h
DUF1474
Motif
Other DBs
NCBI-ProteinID:
QEC63803
UniProt:
A0A5B8UYZ7
LinkDB
All DBs
Position
complement(3256793..3258268)
Genome browser
AA seq
491 aa
AA seq
DB search
MLKQNLQQKLLQKLSPQQIQFIKLLQVPTVSLDTRIKEELEENPALEDLSLTNLNEPEEQ
YPDRDPEEDTFNSDEEQGPADEFNIDDYLQEDNLNEYGSRYDQNGDDDDDRKEIPIAVQS
SFFENLQAQLDLVPLSDKDFRIGQQIIGSLDDDGYLRRSITSLTDDLAFSQNIFADDDEV
EEMLKVIQSFDPPGVGARSLQECLLIQLRKKDQNDPVIRKAMQVVENYLDEFTRKHYDKL
EKSLNMTSQELRAVISEILKLNPKPGDSNEVNTKQMQVIPDFHITNNDGFLVLTLNSKNA
PELRVSRSYQEMFEHYDKASQRDKKLKEAVQFVKQKLDSAKWFIDAIKQRQQTLLKTMNA
IMQYQYEFFLTGDDKNLKPMILKDIADRIGMDISTVSRVANSKYVQTEFGTFLLKSFFSE
AIQTESGEEVSNKEVKKILEENIGAEDKRHPLADERLTEILKEKGYNIARRTVAKYREQM
NIPVARLRKEL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacagaatcttcaacagaaacttttacaaaagctttccccgcagcaaatccaa
tttatcaaattgctgcaggtgcccaccgtttccctggacacacggataaaagaggaatta
gaggagaatccggcgcttgaggatctgagtttaactaacctgaacgagccggaggagcaa
taccccgaccgtgacccggaagaagatacatttaacagcgacgaagagcagggcccggcc
gacgaatttaatattgacgactacctgcaggaagataatctgaacgaatatggatcgcgc
tatgaccagaatggcgatgatgacgacgaccgcaaggaaataccgatagccgttcaaagc
tcattttttgaaaatttgcaagcccagctagacctggtaccgctttccgataaagatttc
aggataggccaacagatcatcggcagcctggatgacgatggctacctgcgcagatcgatc
acttcgctcacagacgacctggcgttttcgcagaatatatttgcggacgacgacgaggtg
gaagaaatgctgaaggttattcaatcattcgacccaccgggcgtaggcgcacgcagcctg
caggaatgcctgctcatacaattaaggaaaaaggatcaaaacgacccagtaataagaaaa
gccatgcaggtagtagaaaactaccttgatgaatttacccggaaacactacgataagctc
gaaaaatcgctgaatatgacctcgcaggaattgcgtgccgttatatctgaaatactaaaa
ctaaaccccaaacccggagactcgaacgaggttaacaccaagcaaatgcaggttataccg
gatttccatatcactaataacgatgggttcctggtgttaacgttaaattccaagaatgct
cctgaactccgcgtaagccggtcgtaccaggaaatgttcgaacattatgataaggcatcg
caaagagataaaaaactgaaagaggctgtgcagtttgtgaagcagaaactggattcggcc
aaatggttcattgatgccataaaacagcgccagcaaacgctgctgaagaccatgaacgcg
atcatgcagtaccagtatgagtttttcctgacaggcgacgataagaacctgaaacccatg
atattgaaggatattgcggacaggataggcatggatatttcaacggtttcgcgtgtggcg
aattcaaaatatgtacaaaccgaatttggcactttcctgctaaagtccttcttttcagaa
gctattcaaaccgaaagcggcgaggaagtatcgaacaaagaggttaagaaaatactggaa
gagaacatcggcgccgaggataaacgccatccgcttgcggacgagagacttaccgaaata
cttaaagaaaaaggctataacatagcgcgccgtaccgtagccaaataccgcgaacagatg
aacattcctgttgcaaggctgagaaaagaattgtaa
DBGET
integrated database retrieval system
