KEGG   Mucilaginibacter ginsenosidivorans: FRZ54_15620
Entry
FRZ54_15620       CDS       T06123                                 
Name
(GenBank) DNA topoisomerase IB
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
mgin  Mucilaginibacter ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:mgin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mgin03032]
    FRZ54_15620
   03400 DNA repair and recombination proteins [BR:mgin03400]
    FRZ54_15620
Enzymes [BR:mgin01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     FRZ54_15620
DNA replication proteins [BR:mgin03032]
 Prokaryotic type
  DNA Topoisomerases
   FRZ54_15620
DNA repair and recombination proteins [BR:mgin03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      FRZ54_15620
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: QEC63941
UniProt: A0A5B8V000
LinkDB
Position
3408059..3409144
AA seq 361 aa
MNRLIKKLEKIGRDPVITARAAGLRYVADSTPGYTRKRSGKGFAFYDADGKLVKDKELIG
RFNRLVIPPAYTNVWISPAENGHLQFTGTDAAGRKQYRYHPDWNKLRNQSKYHRLQLFAE
YLPAIRKRVDKDMNRPHLDHEKVVALVVRVMELTSIRVGNESYKKLYGSFGLTTLMDRHV
KINGSDLSFEFKGKKGVYHKVALHSKKLARLVKQCRDIPGKELFQYYDAEGKRHSIGSGD
VNDYLKEITGQSFTAKDFRTWAGSVSALYAFREAGEFETVSECKKKIVSVLDEVAINLGN
TRTVCKKYYVHPTVIKSYEEGTIFKYISKLDEDKDVNVVELNTAEKALLDLLANEKLAEA
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaacaggctgataaagaagctcgaaaagatcgggcgcgacccggtgattactgccagg
gcggcggggttacgttatgttgctgattcgacgccggggtacacccgcaaaagatcaggt
aagggtttcgccttttatgacgctgatggtaagcttgttaaagacaaagagctgatcggt
cgctttaatcggctggtgataccacctgcttataccaatgtgtggatatcgccggcagag
aacggccacttgcaatttacaggaacagatgccgcaggccgtaaacaatatcgctaccat
cccgactggaacaaactccgcaatcaatccaagtaccatcgcctccagttatttgctgaa
tatttgcctgctatccgcaaaagggttgataaagatatgaaccgccctcacctcgatcat
gaaaaagtagtcgcactggtggtcagggttatggagctgactagtattcgtgtgggaaac
gaatcttataaaaagttatatggttcgtttgggttaactacgctaatggacaggcacgtc
aaaataaacggctccgaccttagtttcgagtttaaagggaaaaaaggggtttatcataaa
gtggcgctgcatagcaaaaagctggcccggttggtaaagcaatgccgggacatacctggt
aaggagctttttcaatattacgatgcggaaggtaaacggcattcgataggctcgggtgat
gtgaatgattatttaaaagagataaccgggcagagttttaccgccaaggacttccgcacc
tgggcgggtagtgtaagcgcgctgtatgctttcagggaagccggcgagtttgaaaccgtt
tctgaatgcaaaaagaagatcgtcagcgtgctcgacgaagtggccattaatttaggtaac
acgcgtacggtctgcaaaaaatactatgtgcatcccacggtgataaaaagttatgaggaa
ggcacgatattcaaatacatcagcaaactggacgaagataaggacgtgaacgtggttgaa
ctaaacacagccgaaaaagcgctgctggacctgttagcaaatgaaaagctggcagaggcg
agttga

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