Mucilaginibacter ginsenosidivorans: FRZ54_18570
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Entry
FRZ54_18570 CDS
T06123
Name
(GenBank) PKD domain-containing protein
KO
K20276
large repetitive protein
Organism
mgin
Mucilaginibacter ginsenosidivorans
Pathway
mgin02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mgin00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FRZ54_18570
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Gene cluster
GFIT
Motif
Pfam:
PKD_5
PKD
PKD_4
K319L-like_PKD
CHU_C
Ig_7
Motif
Other DBs
NCBI-ProteinID:
QEC64490
UniProt:
A0A5B8UZA6
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All DBs
Position
4068194..4073113
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AA seq
1639 aa
AA seq
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MIKAYAGRLFFTILFTLLMAAGATAQTITTGAVDPGPYGQGSSIAVPITINDATGCITPG
NAFNLYLSDASGNFVAGGKLIGTYNGFYTSFVNGVIPNGTPAGAGYKVRVVSTNPSVTST
TSAAFTINASTAVTAAVSSQIISPTYPEVFGQCEGQAGASFIFQDKSAGSTSTTATFINE
LTKTTEVNNVAIPPATYTFNANTGNYTVLVKAKSAGGTVGTHAYLLLNNVINTNIGATGS
LTVCLINGKGDLTVNIDISSPTGIQYNYPGNLYTISWGDGSAPDVLTLCQIVAQNGQVTH
TFTKASCGNSVVFQPSNVFCGPIGAAPSNDAKVIVPPTNLFTVPPVGCAGQPYTIKNQSD
PGIDPATCAKNAKALYTWLVDGVPVATNYQLSQDFILPATTPAGSHVITLHLQNPISGCG
TADVSHNICLQNPPQPIFSLPSATYCLTAGPFSPNNTSIVDATCDPNNTYIWTITGPAPV
NFAGGTNKNSKTPQFVFTAPGIYQLQLAITTATCGQVVSGQQTIIVNDMPQVTLSPNTTL
CGSNQLLTFDKNPGPTQSTLTGTAQPQPTTYTWTVTGGAFTFQGGTTANSQYPQILFTDF
ATYTIKATEQNTCGTVTKTQTITFVQAPTVTAGNNQTICASSPVAALTGKITGTVVSQQW
VGGTGTFSAGRGSLNTNYTPSAAEIAAGSVTLTLQATTALPAPCNIIGSNITITITPIDN
VTSPPAETICTGQPVNYAITSTSGGTNFTWTASVTSGTATGVAASGNGNTINDIITNTNA
SNPATVVYKITPQNNSCTGNVFTLTVTIDPLPQITAVPVSSPICSNQPAGVTLTSNIPNT
SYTWTSVASAGITGNTNQSNAVSTNSIQDVLINNGTTAGTVTYTITPYNKTCPGPVKTAT
VTVQPLPVQSNPGPDDEVCSTTTYTLQGNNPAPGTGKWTLVKGPAGVTFSDDTKPNAVVS
GLQAGNLYQFQWTITATPTCPPSSNAVNILIDLPTIGGTTTGDATVCSTGNTGQITLAGY
QGNIVRWESSVDNGASWQPIVNVSTTQSYSNLTQTTLYRAIIQSGVCSQLPSTATTITVN
QSPIQAVAGADINVCNATVATLQGNNPAPFNGIWTQTAGPAVTIVNPANPNTQVTGLANG
NTYTFTWTIKGLPPCGDTQSSVNVNVSADVTASFTMDKVQGCGPTTITFVNTSTPAPTGS
YLWDFGDGTPTSTATTPSPHTFAPSPDGKEVTYTITLTPVSNCNLKTPFTAIVKISPAVP
VAIINPSQTTACGGFALTAQNLSPGNNVQYDFYLTDATGNILQHISKTDKSDATFQPVNP
TKVTDYNVYLVATDQCGTQGKSTPIIISASPSSVISLVQIKNDQQSVCLGGSIIFQNIST
GGDRFTYTIYDASQNPVATIPGGPGDFNYTPTAPGTYYVSITAGNNGCGDAAVSALKMFT
VYPIPAPDFTYTLDNDYNVTFTNTTPDDGNTPASSLTYYWDFGDGSNKNTTNAPEVHHYD
YERSPFTVTLRATNLASGCLAVITKTIEVKFLGNLYLPNAFTPSSTNSELNVFKAKGTQI
KEWKMQVFNNFGQLVWETTKLDGNGSPTEGWDGTFKGIPVQQGVYVWQISATFINGTEWK
GMSYNHSLPKRTGVIHLIR
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagcttacgccgggcgtttatttttcactatacttttcacgctgctgatggct
gcgggcgctacggcccaaactattacgacaggtgcggtcgaccccggtccttatggacag
ggttcatccattgcagttccgatcactataaacgatgccacaggctgcattactcccggg
aatgccttcaatctttatttatccgacgcctcgggaaattttgtagccggcggcaaactt
atcgggacatacaatggcttctatacttcattcgttaatggcgtaatacccaacggcacg
cctgccggcgcagggtacaaagtaagggtagtatcaaccaacccttcggttaccagcacc
acatcggctgctttcaccattaatgcaagtactgccgtaacagcagctgtgtcctcacag
atcatcagcccaacctacccggaggtattcgggcaatgcgaaggccaggcaggggcatca
tttattttccaggataaatcggcaggcagcacatcaactacggctacatttatcaacgaa
cttaccaaaacaacagaagtaaataatgtagccattcccccggctacgtatacttttaat
gcaaataccggcaactacacggtgctggtaaaagccaaatctgccggcggaacggttggt
acacacgcatacttgctgctcaataatgttatcaataccaacataggcgccacaggttct
cttaccgtatgtcttattaacggcaaaggcgacctgacagtcaatatcgatatttcatcg
cccacgggtatccagtataactacccaggcaatttatacaccataagctggggcgacgga
tcggcaccggatgttttgacgctttgccagatagtggcacaaaacggccaggttactcac
accttcaccaaagcatcctgcggtaactctgtcgtttttcagcccagcaacgtgttttgc
ggtcccatcggggctgcaccaagtaatgatgccaaagtgatcgtaccgcctactaacctt
tttactgtgccgccggttggttgtgccgggcagccatatacgatcaagaaccaatccgac
ccgggtatcgatcctgcaacctgcgccaaaaacgccaaggcattgtatacctggctggtc
gacggtgtacctgtagctacaaactaccagcttagccaggatttcatattacccgccact
actccggcgggttcgcatgttatcacgcttcacctgcaaaatccgattagcggttgcggt
actgccgacgtttctcataatatctgtttgcaaaacccgccgcagccaatattcagtctg
ccatcggcaacctattgtttaactgccggacctttttcgccaaacaacacctctatcgtc
gacgccacatgcgacccgaataatacttatatctggacgataaccggccctgctcccgtt
aattttgcgggcggcaccaataaaaacagcaaaacacctcaatttgtatttacggcgccg
ggcatttatcagctgcaattagccatcactacggctacatgcgggcaggtggtatcaggg
cagcaaacgataattgtgaatgatatgccgcaagttaccctatcgcccaatacgacactt
tgcggcagtaaccagcttttgacattcgataaaaaccccggccctacccagtcgacactt
acagggacggcgcagccgcaacctaccacttacacctggacggttacgggcggcgccttc
actttccagggaggtacaacggccaacagccagtacccgcagattttatttactgatttc
gctacttacactataaaggcaactgaacaaaatacctgcggaactgtcaccaaaacgcaa
actattacctttgtacaggcgccgaccgtaacagccggtaacaaccaaacgatatgtgcc
agcagtccagtagcagcgttaaccggtaaaataacgggtaccgtagtcagccagcaatgg
gtaggcggtacaggtacgttctctgccgggcgtggctcattaaatacaaactatacgccg
tccgcagcagaaatagcggccggttctgtaacactcaccttacaggctactaccgcattg
ccggcgccatgtaacataataggcagtaatattaccatcactattacacctatcgataat
gtgaccagtccgcctgccgaaactatttgtacgggccaaccggttaattatgccatcaca
tcgacaagtggcggtactaatttcacatggacagcctcggtaacatcgggcacagctaca
ggggttgcagcttcgggtaatgggaataccattaatgatattatcacgaatactaacgcg
agcaaccctgctaccgttgtttacaaaataacaccacagaataacagttgcacgggcaat
gtttttacgttgacggttaccattgatccattaccacagatcacagcagtaccggttagc
tccccgatttgtagtaatcagccggccggagttacgctgacatcgaatattcccaacacc
agctatacatggacgagtgtcgcctcagcaggtattacgggaaatactaatcaatcaaat
gcggtatcgactaattcgatacaggatgtgcttatcaataacggtactacggccggaact
gtgacctataccatcacaccctacaataaaacatgccccggcccggtgaaaacggctacg
gttactgtgcagccgctgcctgtacagtcgaaccctggtccggacgacgaagtgtgcagc
acaacaacctacactttgcagggtaataaccccgcaccaggaacgggcaaatggaccctg
gtaaaagggcctgccggagttactttttcggacgataccaaaccaaacgccgttgtaagc
gggttgcaggccggtaacctttatcaattccagtggacaatcactgctacgccaacatgc
ccgccaagcagcaatgcggttaatatcctcatcgacttgccgaccataggcggtaccacc
accggcgatgcgacagtttgctcgacaggtaacaccgggcaaataacattagctggttac
cagggaaatatcgtgcgttgggagtcatcggttgacaacggagcatcatggcagccgatt
gtaaacgtaagtaccacgcagagctattccaacctaacacaaaccactttataccgggct
attattcaaagcggggtttgtagccagttgccgtcaaccgcaactaccattactgtaaac
caatcacctatacaggcggttgccggtgccgatattaatgtttgtaatgccacggtagcc
acgttgcagggtaataacccggcacctttcaatggaatttggacacaaactgccggacct
gccgtaaccattgtaaacccggcaaaccctaatacacaggttaccggtttagcaaatggg
aatacctacacctttacatggaccattaaaggactgccaccatgcggcgatacccagtcc
tccgtaaatgtgaatgtctctgccgatgttaccgccagctttacaatggataaagtacaa
ggctgcggccctacaacaataacgttcgttaatacatcaaccccggcgcctaccgggagt
tatttgtgggactttggcgacggaacgcctacatcgacggccactactccatcgccgcat
acttttgcaccttcgccggatggtaaagaggtaacgtacacgatcaccttaaccccggta
agcaattgcaacctgaaaacaccctttactgcaatagtaaagataagcccggctgtacct
gtagctattatcaacccgagccagacgacggcctgcggcggcttcgcactgacggcacag
aatttatcgccgggaaataatgtccagtatgatttttacctgaccgatgcaacaggcaat
atcctgcagcacatctcaaaaacggacaaaagcgatgcaactttccagcccgtgaacccg
acaaaagtgacggattacaatgtttacctcgtcgctaccgatcagtgcggaacccaagga
aaatctaccccgatcattatttccgcttcaccctcatcggttatctctctggtacagatc
aaaaacgaccagcaaagcgtttgcctgggcggatcaattatatttcagaatatatctacc
gggggcgaccgctttacttacaccatttacgatgcttcacaaaaccctgtcgctactata
cccggcgggcccggtgattttaattacacgcctaccgcgcccggcacttattatgtttcc
attaccgcgggcaacaatggctgcggcgatgctgcggtttcagcattaaaaatgttcaca
gtttatcctatccccgcacctgacttcacttatacgctggataacgattacaatgtaact
ttcaccaacaccacccccgacgatggtaacacaccggcatcgtcgcttacctattactgg
gatttcggtgacggatcaaataaaaacaccacaaacgcaccggaagtgcatcactatgac
tacgaacggtcgccgtttacggtaacgctccgggctaccaacctggccagtgggtgcctg
gctgtgataacaaaaactatcgaagtaaaattccttggcaacctgtacttgcctaacgct
tttacgccaagcagcaccaacagcgagctaaacgtattcaaagcaaaaggcacgcagata
aaggaatggaagatgcaggtgttcaataatttcggccagctggtttgggaaacaacaaaa
ctcgacggaaacgggtcgcctaccgaaggctgggacggcacatttaaaggcatacctgtg
caacagggagtatatgtgtggcagatatcggccacatttattaacggcaccgagtggaaa
ggtatgtcatataatcattcattgccaaaacgtacgggcgtaatccatttgatcagatag
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