Mucilaginibacter ginsenosidivorans: FRZ54_20170
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Entry
FRZ54_20170 CDS
T06123
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mgin
Mucilaginibacter ginsenosidivorans
Pathway
mgin03420
Nucleotide excision repair
mgin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FRZ54_20170
03430 Mismatch repair
FRZ54_20170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgin03400
]
FRZ54_20170
Enzymes [BR:
mgin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FRZ54_20170
DNA repair and recombination proteins [BR:
mgin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FRZ54_20170
MMR (mismatch excision repair)
Other MMR factors
FRZ54_20170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
AAA_12
ResIII
AAA_11
AAA_22
DEAD
Motif
Other DBs
NCBI-ProteinID:
QEC64781
UniProt:
A0A5B8V276
LinkDB
All DBs
Position
4434005..4436284
Genome browser
AA seq
759 aa
AA seq
DB search
MDYLKGLNPAQQAAVMQTEGPVMIIAGAGSGKTRVITMRVAHLVASGVDAFNILVLTFTN
KAAREMRERIMHAVGAEAKNVWMGTFHSVFAKILRVEADKLGYPNNFTIYDTDDSKSVLR
AILKEMNLDDKLYQPNFVYNRISAAKNNLISWQEYQQNDQIQADDFSSGRGQLGKIYETY
ATRCYRAGAMDFDDLLFKTNELLKRYPDVLYKYQNKFKYLMVDEYQDTNFSQYLIVKKLA
AINENICVVGDDAQSIYAFRGANIQNILNFEKDYPDLKIFKLEQNYRSTQNIVNVANSII
ANNQEQLKKNVFSEKEEGDKIKVMRAFSDNEEGKIVAEGILQERSTKGMKWHDFAILYRT
NAQSRSMEEALRKLNIPYKIYGGLSFYQRKEIKDLIAYFRLTINPNDEEAMKRVINYPKR
GIGDTSVDRIILAADQNMITPWEVIVNPSKYIDGRSSAQVSVFATMIQAFAVITKNQSAY
DAALHIAQHSGLLKDLYEDKSVEGLNRYENIQELLNGIKEFSEREDIEDKSLAVFMQDVA
LLTNDDKDNKPDADTVSLMTIHSAKGLEFPHVFVVGLEENLFPSQMSLNSRTDLEEERRL
FYVAVTRAESKLTISYATSRFKFGTLISCEPSRFLDEIDARYLELDFTAKPAPSSSSFFD
DERNAWSKRGDTFSKPRPATTAPVKTTSILAKAHVPSAGFAPSDTSNLQVGMEVEHERFG
FGKVISLEGNKPDIKATIFFKEIGQKQLLLKFAKLRIVM
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
ttggattatttaaagggactgaacccggcccagcaggccgccgtaatgcaaaccgaaggg
cctgtgatgatcatcgcgggtgccgggtcgggtaaaacgcgtgtgataaccatgcgcgtg
gcgcacctggtggccagtggtgttgatgcctttaacattttggtactaacctttaccaac
aaggctgcccgcgaaatgcgggagcgtatcatgcatgccgtaggcgccgaggcaaaaaac
gtttggatgggcactttccactcggtatttgcaaaaatactgcgggttgaggctgataaa
cttgggtatcccaacaattttaccatttacgatactgacgacagcaagagtgtgctgcgg
gccattttaaaagaaatgaacctggacgataagctgtatcagcccaattttgtttacaat
cgtatatcagctgcaaaaaacaacctgatatcgtggcaggaataccagcagaacgaccag
atacaggcggatgatttttcgagcggccgcgggcaattgggcaaaatatatgaaacctat
gctacgcgctgctaccgcgccggggcaatggattttgacgacctgcttttcaaaaccaat
gaattgctgaaacgctaccctgacgtactttataaataccagaataagtttaagtacctg
atggtggatgagtaccaggatacgaatttttcgcagtatcttattgtgaaaaaactggcg
gccatcaacgaaaatatttgcgtagtgggcgatgatgcacagagtatctatgccttccgc
ggagcgaacatccagaacatcctgaattttgaaaaggattatcccgacctgaaaatattc
aagcttgaacagaactaccgttccacacaaaacatcgtcaacgtagctaacagtattatt
gccaataaccaggagcagctaaagaaaaatgttttttcggaaaaggaagaaggcgataaa
ataaaggtaatgcgcgccttcagcgacaatgaagaaggtaaaatcgtcgccgaaggcatt
ttacaggagcgcagtaccaaagggatgaaatggcacgattttgccatcctgtaccgcacc
aacgcccagtcgcgctcgatggaagaagcgctgcgtaagctgaacataccttataagata
tatggcggcctttcattttaccagcgcaaggaaataaaggacctgattgcctacttcagg
cttacgatcaatcccaacgacgaggaagcgatgaaaagggtgatcaattaccctaaacgc
ggtatcggtgatacttcggtggacaggatcatcctggcggctgatcagaatatgataacg
ccatgggaagtgatcgtcaacccatcaaaatacattgacgggcgcagctcggcacaggtt
agtgtatttgcaaccatgatacaggccttcgcggttataaccaaaaaccaatcggcttat
gatgcggcgctgcatattgcacaacattcgggcctgttaaaggatctttacgaggataaa
tcggtagaagggctgaacaggtatgaaaacatccaggaattgctgaacggtattaaggag
ttttcggaacgcgaggatatagaagataaaagccttgctgtatttatgcaggatgtggcc
ctgctgaccaatgacgataaggacaataaaccagatgccgacacggtatcgctgatgacc
atacactcggccaaaggacttgagtttccgcatgtatttgtggtggggcttgaggaaaac
ctttttccatcgcaaatgtcgcttaattcgcgcaccgacctggaagaagaacggaggctg
ttttacgtcgccgttacccgtgccgaaagcaaactgaccatcagttacgctacatcgcgc
tttaaattcggtacgctgatcagttgcgaaccaagccgtttccttgacgaaatagatgcc
cgctacctcgagctggactttaccgccaaacccgcacccagcagttcgagcttctttgac
gacgaacgtaacgcctggagcaagcgcggcgatactttctccaaaccgcggccggctaca
acagctccggttaaaaccacatccatattagccaaggcccatgtcccgtcggccggcttc
gccccttccgacacttcgaatcttcaggtgggtatggaggtggagcacgaacgcttcggc
ttcggaaaagtgatcagtcttgaagggaataagcccgatattaaggcaactattttcttt
aaagaaattggccagaaacaattactcctaaaatttgccaagctccgtattgtaatgtaa
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