Mucilaginibacter ginsenosidivorans: FRZ54_21835
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Entry
FRZ54_21835 CDS
T06123
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mgin
Mucilaginibacter ginsenosidivorans
Pathway
mgin00521
Streptomycin biosynthesis
mgin00523
Polyketide sugar unit biosynthesis
mgin00541
Biosynthesis of various nucleotide sugars
mgin01100
Metabolic pathways
mgin01110
Biosynthesis of secondary metabolites
mgin01250
Biosynthesis of nucleotide sugars
Module
mgin_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mgin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FRZ54_21835 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FRZ54_21835 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FRZ54_21835 (rfbC)
Enzymes [BR:
mgin01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FRZ54_21835 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Anoct_dimer
Motif
Other DBs
NCBI-ProteinID:
QEC65101
UniProt:
A0A5B8V334
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All DBs
Position
complement(4794580..4795134)
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AA seq
184 aa
AA seq
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MNVTATPLEGCLIIEPRVFGDERGYFFESFNQQKFNEFTGQDTVFIQDNQSYSTKGVLRG
LHFQRGSSAQAKLVRVVKGEVLDVAVDLRKGSKTYGQHFDIRLSDKNNLQLLIPRGFAHG
FVVLSDDAIFQYKCDNYYDRSAEGGLHYADPAFAIDWILPHEQLIVSQKDIELPNLTDAG
DTGF
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaacggcgacaccgcttgagggttgtctcatcattgaaccgagagtttttggg
gatgagcgtggctatttttttgaaagttttaaccaacagaaatttaacgaatttacgggc
caggataccgtatttatacaagataatcaatcatattctaccaaaggggtattgcggggc
cttcatttccagcgcggtagttcggcacaagctaaactggtacgggttgtaaaaggcgaa
gtacttgacgttgcagttgacttaagaaaaggttccaaaacctacggacagcattttgac
atcaggctttcggataaaaataatttacaattacttataccacgcggctttgcgcacggt
ttcgtcgtattaagtgacgacgctatattccaatataagtgtgataactattacgatagg
tcagctgaaggcgggttgcattatgccgatccggcttttgcaattgattggatcctgccg
catgagcaattaattgtatcgcaaaaagatattgaattgcctaacttaaccgacgccggt
gataccggcttttaa
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