Candidatus Malacoplasma girerdii: MGM1_2040
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Entry
MGM1_2040 CDS
T03441
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mgj
Candidatus Malacoplasma girerdii
Brite
KEGG Orthology (KO) [BR:
mgj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mgj03016
]
MGM1_2040 (truB)
Enzymes [BR:
mgj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MGM1_2040 (truB)
Transfer RNA biogenesis [BR:
mgj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MGM1_2040 (truB)
Prokaryotic type
MGM1_2040 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AIV03586
UniProt:
A0A097SSM8
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All DBs
Position
complement(195280..195996)
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AA seq
238 aa
AA seq
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MLSNKTNIINLTREELENKGLFAINKPLTWTSNDVINFLKSRFKFTKVGHGGTLDPYATG
VLIIAVEQHTKKLHHALNTNKKYDVLIQLGESSPSYDLGTEINEKKEVPNLTVAEIDNII
QKYFLHNYLQSPPSYSAKKINGVRAYQLARKNMDVVLQSVLVNINDYHINFYDEKTKIIN
ISLDVSKGFYVRSFAHDLAIKLNTVGVVVSLIRTETNGFSLNDCLQIIKKPKQQLKNT
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgctatcaaataaaactaatataatcaacttaacacgtgaagaattagaaaataagggt
ttgtttgctattaataaaccattaacttgaacaagtaatgacgttattaattttcttaaa
tcacgatttaaatttaccaaagtaggtcacggcggaacacttgatccatatgctactggt
gtattaatcattgcggttgaacaacatacaaaaaaattacatcatgcattgaacacaaac
aaaaagtatgatgtcttaattcaattaggagaatctagcccttcttatgatttaggaact
gaaattaatgaaaaaaaagaagttccaaatttaacagttgctgaaattgacaatattatt
caaaaatattttcttcataactatttgcaatcaccaccaagttattcagcaaaaaaaatt
aatggtgtacgtgcttatcaattagcgcgtaaaaatatggatgtggtgcttcaatctgtt
cttgttaatattaatgattaccatattaatttctatgatgaaaagaccaaaataattaat
atctcactagatgtatcaaagggattttatgtacgctcttttgctcatgatttagccatt
aaactaaatactgttggtgttgttgtatcattaattcgaactgaaactaatggatttagt
ttaaatgactgtttacaaattattaaaaaaccaaaacaacaattaaaaaatacctag
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