Candidatus Malacoplasma girerdii: MGM1_2970
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Entry
MGM1_2970 CDS
T03441
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mgj
Candidatus Malacoplasma girerdii
Pathway
mgj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mgj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MGM1_2970 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgj03400
]
MGM1_2970 (ung)
Enzymes [BR:
mgj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MGM1_2970 (ung)
DNA repair and recombination proteins [BR:
mgj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MGM1_2970 (ung)
Prokaryotic type
MGM1_2970 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
TRF
Motif
Other DBs
NCBI-ProteinID:
AIV03670
UniProt:
A0A097SSW1
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All DBs
Position
complement(290109..290768)
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AA seq
219 aa
AA seq
DB search
MIEQLNTDWKEVIENLKKETWFKNLLDQVSLLYKKQVVYPEKENVFRCFNYFNVNETKVV
ILGQDPYYNPNQANGLAFSLFPGSKITKSLENIFKELESDLGYQRNNVDLTDWAKQGVLL
LNTVLTVEAHKPLSHRYLKWNMFTDYIISYINKHVNHVVFVLWGNEAKQKIPMINQNKHT
ILSSSHPSPLSAHVSFFNSHIFSRINYDLSIHNLKEIIW
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgattgaacaattaaataccgattgaaaagaagtgattgaaaacttaaaaaaagaaact
tgatttaagaatttacttgatcaagtttctttgctatataaaaaacaagtagtttatcct
gaaaaagaaaatgtttttcgttgttttaattactttaatgttaatgaaacaaaggttgtt
attcttggacaagatccatactacaatcctaatcaagccaacggattagcttttagtcta
tttcctggaagtaaaatcactaaatcgttagaaaatatttttaaagaacttgaaagtgat
ttaggttatcagcgaaacaatgtggacttaactgattgagctaagcagggagtgttattg
cttaatacagtattaacagttgaagcacataaaccactttcacaccgatatttaaaatga
aatatgtttactgattatattatcagttatattaataaacatgttaatcatgtagttttt
gttttatgaggcaatgaagcaaaacaaaaaataccaatgattaatcaaaataaacacaca
atattatcttcttcacacccttcaccgctcagtgctcatgtttcgttttttaattcacat
atttttagccgaattaattacgatttatcaattcataatcttaaagagattatttgataa
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