Candidatus Malacoplasma girerdii: MGM1_4810
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Entry
MGM1_4810 CDS
T03441
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
mgj
Candidatus Malacoplasma girerdii
Pathway
mgj03030
DNA replication
mgj03430
Mismatch repair
mgj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mgj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MGM1_4810 (holB)
03430 Mismatch repair
MGM1_4810 (holB)
03440 Homologous recombination
MGM1_4810 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgj03032
]
MGM1_4810 (holB)
03400 DNA repair and recombination proteins [BR:
mgj03400
]
MGM1_4810 (holB)
Enzymes [BR:
mgj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MGM1_4810 (holB)
DNA replication proteins [BR:
mgj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MGM1_4810 (holB)
DNA repair and recombination proteins [BR:
mgj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MGM1_4810 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
SIR2
Motif
Other DBs
NCBI-ProteinID:
AIV03846
UniProt:
A0A097STC3
LinkDB
All DBs
Position
complement(497512..498303)
Genome browser
AA seq
263 aa
AA seq
DB search
MLKQLLLSKNKPHSIIFVESRFCHLEKVIEDFFCSMLTNKHDIERLKNNQYFDYISFNGY
IENIKKENIIEIQNKFSLTSFEKDNLKFYTIFGIETTNKQSLNSLLKFLEEPQDNAYGIL
TTRNIAKVIPTITSRCQVIYLPTDLTYFQNEIKKYQLNNEQVKLIYQTYYNFSEFEKEFE
NGFFNTCTNFVQSLIINHSNLAKLKGLSAEFRSFDYLQIKRILCFIKVLVKDEKGIILNL
INQLNLNPIKALIFNEILSLWNI
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaacaattacttttatctaaaaataaaccacattcaatcatttttgttgaatca
cgtttttgccacttagaaaaagtaatagaggacttcttttgttcaatgttaactaataag
catgatattgaacgattaaaaaataatcaatactttgattacattagttttaatggttat
attgaaaatattaaaaaagagaacattattgaaattcaaaataaattttctttaaccagt
tttgaaaaagataacctaaagttttatactatttttggcattgaaacaactaataaacag
tcattaaattcgttgttaaagtttcttgaagagccacaagataatgcttatggaatttta
acaactagaaacattgcaaaagtgattccgacaattactagtcgatgtcaagttatttat
ttgccaactgatttaacatactttcaaaatgaaattaaaaaatatcagttaaacaatgaa
caggttaagttaatttatcaaacatattacaactttagtgaatttgaaaaggaattcgag
aacggattttttaatacatgcactaattttgttcaatctttaattattaatcactctaat
cttgctaaattgaagggattatcagcagaatttcgtagttttgattatttacaaattaaa
cgaattttatgctttattaaggttttagtgaaagatgaaaaaggaattattctcaattta
attaatcagttaaatttaaatcctattaaagctttaatttttaatgaaattttatcttta
tgaaacatttaa
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