Candidatus Malacoplasma girerdii: MGM1_4870
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Entry
MGM1_4870 CDS
T03441
Symbol
pcrA
Name
(GenBank) ATP-dependent helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mgj
Candidatus Malacoplasma girerdii
Pathway
mgj03420
Nucleotide excision repair
mgj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MGM1_4870 (pcrA)
03430 Mismatch repair
MGM1_4870 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgj03400
]
MGM1_4870 (pcrA)
Enzymes [BR:
mgj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MGM1_4870 (pcrA)
DNA repair and recombination proteins [BR:
mgj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MGM1_4870 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
MGM1_4870 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
AAA_12
AAA_11
PcrA_UvrD_tudor
DEAD
Motif
Other DBs
NCBI-ProteinID:
AIV03852
UniProt:
A0A097STF1
LinkDB
All DBs
Position
502401..504626
Genome browser
AA seq
741 aa
AA seq
DB search
MSLNLNELNKQQIEAVEHVDGPILVVAGAGSGKTKVLTSRIAYLLDEVGIPDQQVLAITF
TNRAAEEMRQRVGKLIQRGIKTSILTYHALCLRILREDIEYVHGKRDFNILDVEDRKQII
SNIYKDWNLNDGFSKLIKPSLMFDIIDVVSSNECAFESDSIYVTSIEIDDIKQHFDQISK
LNPKDQEYVIGIYREYIKRKKEINALDYNDLINGVYKLFKHNEEIVKKWKRRFNYILVDE
FQDTDYFQFQILRYLVNENHNIFAVGDPDQTIYQWRGAYAGIFDDYINAFAPKQVLLEKN
YRSTTNILTVANTLIENNVNRIPKYLISNISQNAPVIYYDGYSSSNEGSYIAKTITDLVK
NKKYEYNDIMVLYRNNFLSRFIERSLIDAGIPYYIYGGFKFYERKEIKDLLAYLKLVNSP
DDELSFIRVINRPKRNIGEETIQKIRTFAANKKINFMEAIKLKDDPEINWNTTKIHNFLT
LMENIRLKIKDKKIHEGLTFIIAAIQYEDFIRSESLDNVAKSRLDNIKELIDSIKEYENT
SEDPSLKNYLDSISLYTDSSSNDERYKNKNTVSLMTVHYAKGTERKVVFFSGLYQGVLPS
NRSLEKNEVEEERRIAFVAITRAKELLYLTTNHGSMPKPSFPSQFINEIGHNNFQTVQSS
YQPTSDLDLNWFDSSKSNDFSSMYSKEKTNQYHVGDNIVHTYFGKGIVVEVVNDMITIMF
AKPHGKKTLVANHKAIKRILN
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctaaatttaaacgaattaaataaacagcaaattgaagctgttgaacatgttgac
gggccaattttggttgttgcaggagctggaagtggtaaaacaaaagttttaacatcacga
attgcttatttattagatgaagttggaattcctgatcaacaagttttagctattacgttt
actaatcgagcagctgaagaaatgcgacaaagagttggtaaattaattcaacgcggaatt
aaaacaagcattcttacttaccatgctttgtgtctaagaattttacgtgaagatattgaa
tatgttcatggtaaaagagactttaatattttagatgtagaagatcgtaaacaaattatt
agcaacatttataaagattgaaatttaaatgatggatttagcaaattaattaaaccatca
ttaatgtttgatattattgatgttgtaagtagtaatgaatgtgcttttgaaagcgatagc
atttatgtaacatcaattgaaattgatgatataaaacaacattttgatcaaattagcaaa
ttaaatccaaaagatcaagaatatgttataggaatttatcgtgaatacattaaacgtaaa
aaagaaataaatgctcttgattacaatgatcttattaatggtgtttataaattattcaaa
cacaacgaagaaatagttaaaaagtgaaagcgtcgttttaactacattcttgttgatgaa
tttcaagacactgactatttccaatttcaaatcttgcgttatttagttaacgaaaaccat
aatatttttgctgttggcgatccagatcaaacaatttatcaatgacgtggtgcatatgca
gggatatttgatgattacattaatgcctttgccccaaaacaagttttacttgaaaaaaat
tatcgatcaacaactaacattttaactgttgctaatacattaattgaaaataatgttaat
agaattcctaaatatttaataagtaatatatctcaaaatgcacctgttatttactatgac
ggatatagttcatctaatgaaggcagttatatcgccaaaacaattactgacttagtaaaa
aataagaaatacgaatacaatgatattatggtcttgtatcgcaacaatttcttatcacga
tttattgaacgttctttaattgatgccggtattccttattacatctatggtggctttaaa
ttctatgaacgaaaagaaattaaagatctacttgcatacttaaagttagttaatagtcct
gatgatgaattgtcatttataagagttattaatcgacctaaacggaatattggggaagaa
acaattcaaaaaattagaacttttgcggccaataaaaaaataaacttcatggaagctatc
aaattaaaggacgatccagaaattaactgaaatacaacaaaaattcataacttcttaact
ttaatggaaaacattcgtttaaaaattaaagataagaagattcatgaaggtttaactttt
attattgctgcaattcaatatgaagattttattcgttctgaatctctcgataacgttgca
aaatcacgattagataacattaaagaacttattgattcaattaaagaatatgaaaataca
agtgaagatccttcattgaaaaattacttagattcaatcagtctttatactgattcatca
agtaatgatgagcgctataaaaacaaaaatactgttagtttaatgacagttcattatgcc
aaaggaaccgaaagaaaagttgtttttttttcaggtttatatcaaggtgttttaccaagc
aaccgttcactagaaaaaaatgaagttgaagaagaaagaagaattgcttttgttgcaata
actcgagctaaagaattactttatttaactactaatcacggtagtatgcctaaaccatca
ttcccgagtcaatttatcaatgaaattggtcacaacaatttccaaacagttcaatcttca
taccaaccaactagtgatttagatttaaattggtttgatagtagtaaatcaaatgacttt
tcatcaatgtacagtaaagagaaaactaatcaatatcatgttggtgacaacattgttcat
acttattttggtaaaggaattgttgttgaagtagttaacgatatgatcaccattatgttt
gcgaaacctcacggtaaaaaaacactagttgcaaaccataaagcaattaaaagaatttta
aactaa
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