Mucilaginibacter ginsenosidivorax: FSB76_01565
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Entry
FSB76_01565 CDS
T06204
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mgk
Mucilaginibacter ginsenosidivorax
Pathway
mgk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mgk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FSB76_01565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgk03400
]
FSB76_01565
Enzymes [BR:
mgk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FSB76_01565
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FSB76_01565
DNA repair and recombination proteins [BR:
mgk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FSB76_01565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QEC74697
UniProt:
A0A5B8VSX0
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All DBs
Position
complement(345015..345788)
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AA seq
257 aa
AA seq
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MAELPDLTVFAQILTRRFKGKVLETVDVTVAKKLNVTTAQLKSALEGHELTGVSREGKTL
QFHFDGGQVLGLHLMLRGELISLDGDKIPRFQVMAFHFKGGGGFAVVDLQKAATPTLQPK
PAAAPDALQLEKDTFINLLAKKRSVIKTLLMDPKVMRGIGNSYTDEILYHSHISPFSIAN
AIPEKYAVQLFKSMRMVLEKAIADIAEANGDELTGELRNFMAIHNPALKKTAKGEEILKD
KIGGRTTYYTKAQELFV
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggctgaactacccgacctgaccgtattcgcgcagatccttacccggagatttaaaggc
aaagtgctggaaacagttgatgtcacggtcgccaaaaagctaaatgtgaccactgctcaa
ttaaaatcagcattagaagggcatgaactgacaggcgtgtcccgcgagggcaagaccctg
cagtttcattttgacggcggccaggtcttagggctgcacctgatgctccggggggaactc
atcagtctggacggtgacaaaataccgcgcttccaggtcatggcctttcatttcaaaggc
ggcgggggctttgcagtcgttgacctgcaaaaagcggccacaccaactttgcagcccaaa
ccggccgcggctccggatgccctgcaattggaaaaggacacttttatcaacttactggct
aaaaaacgttcggtcattaaaaccttattgatggaccctaaggtgatgcgtggtatcggc
aattcttataccgacgagattctctaccattcccacatctcgccattttcgattgccaat
gcgattccggagaaatatgcggtgcagctcttcaaaagcatgaggatggtattagaaaag
gcgattgcagatattgccgaagccaatggtgacgagcttactggtgaattaaggaatttt
atggctatccataacccggcgttaaaaaagacggcgaagggcgaagaaattttaaaagat
aagatcggcggacggacgacttactatacgaaggcgcaggagttatttgtctga
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