Mucilaginibacter ginsenosidivorax: FSB76_05395
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Entry
FSB76_05395 CDS
T06204
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mgk
Mucilaginibacter ginsenosidivorax
Pathway
mgk00300
Lysine biosynthesis
mgk00470
D-Amino acid metabolism
mgk01100
Metabolic pathways
mgk01110
Biosynthesis of secondary metabolites
mgk01120
Microbial metabolism in diverse environments
mgk01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
mgk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FSB76_05395 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FSB76_05395 (lysA)
Enzymes [BR:
mgk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FSB76_05395 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Augurin
Motif
Other DBs
NCBI-ProteinID:
QEC75406
UniProt:
A0A5B8VY85
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All DBs
Position
complement(1328927..1330132)
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AA seq
401 aa
AA seq
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MFSKANINKFQELDTPFYYYDMGVLRETLDACRDASVKHGFHVHYAMKANFNPRVLDMIQ
SFGFGADCVSGNEVRAAIEHGFDKGKVVFAGVGKSDREINYALDADIFCFNVESVQELEV
INELAAAKGKKANVAIRINPNVDAHTHHFITTGLDENKFGINIWQLPDVATALRKCASLQ
FLGIHFHIGSQITDLEVYKSLCTRINEMQDWFEDHGFPVKVLNTGGGLGVDYYSPDTNIA
DFENYFQVFKNFLNVKPGQEVHFELGRALVAQSASLISRVLYVKNGKKKNFLVLDAGMTE
LIRPMLYQAYHQIENISKSQESRIKNQDNSSPATANMQLATDIKYDVVGPICESTDCFQK
DVDLPESFRGDLIAVRTAGAYGEVMASGYNLRDRVGSIYSE
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtaaagctaatataaataaatttcaagagttagatacccctttctattattac
gatatgggggtattgcgtgaaacattggatgcatgtcgtgatgcctcggtaaaacatggc
tttcatgtacactatgccatgaaggcaaactttaaccccagagtgctggatatgatccaa
tcttttggttttggtgccgattgcgtaagcggcaacgaagtgagggcagcaattgaacat
ggttttgacaaaggcaaagtggtttttgcgggggtaggaaaatcagaccgtgaaataaac
tacgcgcttgatgccgatattttttgtttcaacgttgagtcggttcaggagttggaagtg
attaatgaattggcggcggccaaaggcaaaaaggccaatgtagctatccgtattaaccca
aatgttgatgcacatacacaccattttattactaccgggttagatgaaaataaattcggc
atcaatatatggcagctgcccgatgtggctactgctttacgcaaatgtgccagcctgcag
tttttaggtatacactttcatataggttcacaaattaccgacctggaggtttataaaagc
ctttgtacccgaattaacgaaatgcaggactggtttgaagatcatggtttcccggttaaa
gtactaaataccggcggtggcttaggtgttgattactacagccccgacaccaatattgcc
gattttgaaaattatttccaggtgtttaaaaacttcctgaacgtaaaaccagggcaggaa
gtacactttgagcttggccgtgctttggtagctcaaagcgcctcgctaatatcaagggtg
ttgtatgtgaaaaatggcaaaaagaaaaactttctggtactggatgccggcatgaccgaa
ctgatacgcccaatgctttaccaggcttaccaccagatagaaaatataagcaagagtcaa
gaatcaagaatcaagaatcaagacaactcatcaccggcaactgccaacatgcaactggca
accgatatcaaatacgacgtggtaggccccatttgcgaaagcacagattgttttcagaag
gatgttgacctgccggaatcattccgtggagatctgattgccgtacgtactgccggtgca
tatggcgaagtgatggcctctggttacaaccttcgcgatagggtagggagtatttattcg
gaatag
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