Mucilaginibacter ginsenosidivorax: FSB76_08505
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Entry
FSB76_08505 CDS
T06204
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
mgk
Mucilaginibacter ginsenosidivorax
Pathway
mgk00010
Glycolysis / Gluconeogenesis
mgk00020
Citrate cycle (TCA cycle)
mgk00260
Glycine, serine and threonine metabolism
mgk00280
Valine, leucine and isoleucine degradation
mgk00310
Lysine degradation
mgk00380
Tryptophan metabolism
mgk00620
Pyruvate metabolism
mgk00630
Glyoxylate and dicarboxylate metabolism
mgk00640
Propanoate metabolism
mgk00670
One carbon pool by folate
mgk00785
Lipoic acid metabolism
mgk01100
Metabolic pathways
mgk01110
Biosynthesis of secondary metabolites
mgk01120
Microbial metabolism in diverse environments
mgk01200
Carbon metabolism
mgk01210
2-Oxocarboxylic acid metabolism
mgk01240
Biosynthesis of cofactors
Module
mgk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mgk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mgk_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
mgk_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mgk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
FSB76_08505 (lpdA)
00020 Citrate cycle (TCA cycle)
FSB76_08505 (lpdA)
00620 Pyruvate metabolism
FSB76_08505 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
FSB76_08505 (lpdA)
00640 Propanoate metabolism
FSB76_08505 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FSB76_08505 (lpdA)
00280 Valine, leucine and isoleucine degradation
FSB76_08505 (lpdA)
00310 Lysine degradation
FSB76_08505 (lpdA)
00380 Tryptophan metabolism
FSB76_08505 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
FSB76_08505 (lpdA)
00670 One carbon pool by folate
FSB76_08505 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mgk04147
]
FSB76_08505 (lpdA)
Enzymes [BR:
mgk01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
FSB76_08505 (lpdA)
Exosome [BR:
mgk04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
FSB76_08505 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
FAD_binding_2
Pyr_redox_3
NAD_binding_8
HI0933_like
GIDA
Thi4
FAD_binding_3
DAO
Lys_Orn_oxgnase
AlaDh_PNT_C
IFT46_B_C
DUF3394
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
QEC75984
UniProt:
A0A5B8VWB4
LinkDB
All DBs
Position
complement(2011155..2012558)
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AA seq
467 aa
AA seq
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MQYDVIVIGSGPGGYVAAIRCAQLGLKTAIVEKYSTLGGTCLNVGCIPSKALLDSSEHYH
NAAHTFTTHGIKLENLSIDFGQMVKRKQEVVNANTSGISYLMKKNKIDTHYGVGSFKDKN
TITVKKADGIETEITGKNVIIATGSKPSALPFLKIDKKRIITSTEALSLTEVPKHLVLIG
GGVIGLELGSVYARLGAKVSVIEFMDGIIPTMDKALGRELQKVLTKLGMEFYLGHKVTGA
TVKGKEVTVTFDTPKGEKQELKGDYCLVAVGRVAYTDGLGLDKIGITVEERGRKITVNDH
LETSVKGVYAIGDVIKGAMLAHKAEDEGTLVAEIIAGQKPHIDYNLIPGVVYTWPEVAAV
GQTEEQLKAAGVKYKTGSFPFKASGRARASGDLDGFVKVLADATTDEILGVHMIGPRAAD
MIAEAVVAMEFRASAEDIARISHAHPTYTEAMREACLAATENRAIHI
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatgatgttatcgttatcggttcgggcccaggtggctatgtggccgctatacgt
tgcgcccagttgggtttaaaaaccgctatcgtcgaaaaatatagtacccttggcggtaca
tgccttaatgtgggctgtatcccatccaaggccctgctcgattcatccgagcattaccat
aacgccgcccacacttttaccacccatggtattaagctggaaaatttaagtatcgatttt
ggccagatggtaaaacgcaagcaggaagtagtaaatgccaataccagcggcattagctac
ctgatgaagaaaaacaagattgatacccactacggtgtaggatcatttaaagataaaaac
accatcactgttaaaaaggccgatggtatcgaaaccgagataaccggtaaaaatgtaatt
attgccaccgggtcaaaaccatcggcattgccatttttaaaaatcgataaaaaacgcatc
attacttcaactgaggctttatcgcttaccgaagtgcctaagcacctggtgctgattggc
ggtggtgttattggcctggagctgggttcggtatatgcccgtttaggcgcaaaagtatct
gtaattgaatttatggatggcattatcccaactatggacaaagcccttggccgcgaactg
caaaaagtgttgactaaactgggcatggagttttacctgggccataaagtaaccggcgct
accgtaaagggtaaagaggtgactgttactttcgacacgcctaaaggcgagaaacaagag
ttaaaaggcgattattgcctggtggccgttggccgcgtagcttataccgatggtttaggt
ttagataaaattggcatcaccgttgaagaacgcggccgcaaaattaccgtgaacgaccac
ctggaaaccagcgttaaaggtgtttatgccattggcgatgtaattaaaggcgccatgctt
gctcacaaggcagaagatgaaggtacccttgttgccgaaattattgccggccagaaaccg
catattgattacaacctgatccccggtgtagtatatacctggcccgaagttgcagctgtt
ggccagacagaagagcaattgaaagcagccggtgtaaaatataaaacaggatcgttcccc
tttaaagccagcggccgcgcacgtgccagcggcgacctggacggttttgttaaagtactg
gccgatgccactaccgacgaaattttaggcgtacacatgattggcccccgcgcggcagat
atgattgccgaggctgtagttgccatggaattccgtgcatcggcagaggatatagcccgg
atcagccatgcccacccaacttatactgaggctatgcgcgaggcttgtttagcagctacg
gagaatagagcgattcatatttaa
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