Mucilaginibacter ginsenosidivorax: FSB76_19910
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Entry
FSB76_19910 CDS
T06204
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mgk
Mucilaginibacter ginsenosidivorax
Pathway
mgk00521
Streptomycin biosynthesis
mgk00523
Polyketide sugar unit biosynthesis
mgk00541
O-Antigen nucleotide sugar biosynthesis
mgk01100
Metabolic pathways
mgk01110
Biosynthesis of secondary metabolites
mgk01250
Biosynthesis of nucleotide sugars
Module
mgk_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mgk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FSB76_19910 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FSB76_19910 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FSB76_19910 (rfbC)
Enzymes [BR:
mgk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FSB76_19910 (rfbC)
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Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QEC78089
UniProt:
A0A5B8W3I0
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All DBs
Position
4755399..4755953
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AA seq
184 aa
AA seq
DB search
MTIVPTLLEGCIVITPRIFNDDRGYFFESYNEQNFNKALGYQANFVQDNQSYSTKGVLRG
LHLQKGEHAQAKLVRVTKGEVLDVAVDLRTGSPTYGQHFSVKLSEENNQQLFIPRGFAHG
FIVLSDVAVFQYKCDNYYNKTAEGGLHYADPELNIDWGMSATELLVSEKDLELPFLKDAG
DLGF
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgacaattgtcccaaccctactcgagggatgtatagtgattaccccaagaatatttaat
gatgatcggggatatttttttgaatcgtacaatgaacaaaatttcaataaagcactgggc
taccaggctaattttgttcaggataatcaatcttattcaaccaaaggtgtactcaggggg
ctacatcttcaaaaaggcgaacatgcacaggcaaaattggtaagagtaacaaaaggagag
gtattggatgttgctgttgatctgagaaccggatcacctacctacgggcaacacttttcg
gtaaagctatccgaagaaaataatcaacaactttttattcccaggggatttgcacatggc
tttattgttttgagcgatgtggcagtttttcaatacaaatgcgataattattataacaaa
accgccgaaggtggtttacattatgcagatccggaattgaatattgattggggtatgtcg
gcaactgaactgttggtgtctgaaaaagacctggagctgccatttttaaaagatgcaggc
gatctgggtttttaa
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