Malassezia globosa: MGL_0860
Help
Entry
MGL_0860 CDS
T01043
Name
(RefSeq) hypothetical protein
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
mgl
Malassezia globosa
Pathway
mgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MGL_0860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgl03019
]
MGL_0860
Enzymes [BR:
mgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MGL_0860
Messenger RNA biogenesis [BR:
mgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
MGL_0860
mRNA degradation factors
3'-5' decay
Ski complex
MGL_0860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
DEAD
MTR4-like_stalk
ResIII
DEXQc_Suv3
Helicase_C
MTR4_beta-barrel
nSTAND3
AAA_22
ATPase_2
Motif
Other DBs
NCBI-GeneID:
5855898
NCBI-ProteinID:
XP_001731592
UniProt:
A8PVG7
LinkDB
All DBs
AA seq
1224 aa
AA seq
DB search
MWEALALLPGADAEACRTAIADEILEPTYGLDASMMLSSQTHWDREQQFEQMLALDPSPC
ITSLQFIRSGLKGRVIGYREVVADAVKRGEEAIDMSLQRPLASKQNYVRGSLTSTPFRPG
GLQDVDEENEDIEEGDLGQMPGTDDVHFRTVPPGFSRGLNVTAPEFLDTTAPAWMGDVQD
VAPRFLDRHVITVDDDGLYKRPDVAPPPKNDDAKVDELLPDEYLPRLLQDSAARPTQEKR
EWAHMVDSSKKMSNFHELVPQMAHEYPFELDTFQKQAVYHLERNDSVFVAAHTSAGKTVV
AEYAIALAMKHMSRCIYTSPIKALSNQKFREFKQAFGAENVGIVTGDVKINPEAACLIMT
TEVLRSMLYRAGELIRDVEFVIFDEVHYVNDQERGVVWEEVIILLPAYVNTVLLSATVPN
TQEFADWVGRTRRRDVYVISTPKRPVPLEHFLYAGKQLHKIVDANGRFLSKGVNEAADAL
LSKKEREAAYTTGSSAQRGHRGGRGGGPAGRSGGSSGRGGGNSSAGGGVGRPRPSMASDR
SLWVNIVGLLKKQSLLPVVVFVFSKKKCEEYADSLPNTDLSTAKEKSEVHVLIERSLMRL
KEEDRQVPQIARMRDLLSRGIGVHHSGLLPIVKELVELLFQRTLVKVLFATETFAMGVNM
PARSVVFSGVRKNDGNKFRNLLPGEYTQMAGRAGRRGLDKTGVVIILSDNPELNPLNRMI
LGESTKLKSQFRITYCMILNLLRIETLKVEDMIKRSFSENAAQKLMPQHQGRLKNLEHKL
HAWTKRLESSASLPIDALSRLYDLSNKLVRVNDNLLALAYEHPQGAKLFSSGRVVLVYTG
THILSPAMIVRLASNKKFLVLLAVLPDQQPLEKHQAPFWVTSKLAKDMARDSEYMPELQE
VSLSKIAFVSSFSVPIPATLFQSRRQAKLQQGLDLLRPSIEQIRNHLEAAGDEAARAILD
LEADWSRVRRIDFQDTQKDRNQILSELIPEQGLMQKPGFDKEFKLLTICKLTEWEMAKVS
ASLSNQNLELLPDYHQRVDVLKELRFIDPESETVMLKGRIACGIRSVNELIMTELILDNT
FVDYEPHEIAALLSVFHFRENTSLTPELNDTLQRGLDHISKTADRIAAVQMAHHLQPEDD
ASTLHTGLVEVVYEWTRGLHFSDIMQLTDVGEGTIVRCITRLDETFREVRECASVIGNAP
LYQKMETCQQLVRRDIVFAASLYF
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaggcgctcgctctactgccaggcgcggatgccgaggcatgtcgaactgcgatt
gctgatgagatattggagcccacttatgggcttgatgcgtctatgatgcttagttctcaa
acgcactgggacagagagcagcaattcgaacagatgttagctctcgatccgtcaccatgt
atcacgtcattgcagttcatccggtctggtctcaagggtcgggtcattggataccgagaa
gtggtagctgatgctgtgaaacggggcgaagaagccattgacatgtcgctccagcggcca
ctagcttcgaagcagaattatgttcgtggctcgttgacgtcgacgccattccggcctggt
ggtctgcaagatgtagacgaagaaaacgaagacattgaggaaggagatttgggccaaatg
ccaggcacagatgatgttcatttccgcactgtgccgccgggcttttctcgcggtctcaat
gttactgctcccgagttcttggacacgacggcgcctgcatggatgggagacgttcaggat
gtggcgccccggtttcttgaccgccatgtcattaccgttgatgatgatgggctatacaag
aggccagatgttgcgccgccgcccaagaatgatgacgcgaaggtcgacgaattactgccg
gacgaatatctaccgcgccttcttcaagactccgcggctcggcccacccaggagaagcgc
gaatgggctcatatggtcgactcatccaagaaaatgtcgaactttcacgagctcgtgcca
cagatggctcacgagtacccatttgagctcgatacgttccagaagcaggctgtataccat
ttggaacggaacgattcggtatttgttgcagctcacacatcggccggtaaaacggttgtc
gcagagtatgctatagctctagcgatgaagcacatgtcgcgatgcatctatacgtcaccc
atcaaggccctgtctaatcaaaaattccgtgagttcaagcaggctttcggtgcagaaaat
gtcggcattgtcacgggcgatgtgaagatcaatcccgaggccgcttgcctcatcatgacg
actgaggtactccgcagcatgctgtatcgagcgggcgagctaattcgcgatgtggaattc
gtcatctttgatgaagtgcactatgtgaatgaccaggagcgtggtgtcgtttgggaggaa
gtcatcattcttctccccgcttatgtcaacacggtgttgttgtccgctactgtgccgaac
acgcaggaattcgccgattgggtaggccgtacgcggcgccgtgatgtatatgtgatttcg
acgccaaagcggcctgtccctctcgagcactttctgtacgcgggcaagcaactgcataaa
attgtcgatgccaatggtcgctttctgagcaagggtgtgaatgaagcagctgacgcactt
ctgtccaagaaggaacgtgaggcggcgtacacgaccggcagcagtgcacagcgcggccat
cgaggtggccgaggtggtggtccggccggacggtctggcggatctagcgggcgtggtggc
ggcaacagcagtgcgggcggtggtgtcggtcgtccgcgcccgagtatggcgtcagaccgg
tccttgtgggtgaacattgtcggccttttgaagaagcaatcacttttacctgttgtcgtt
ttcgtgttttccaaaaaaaagtgcgaagaatatgcagactcgcttcccaacacggacttg
tcgaccgcgaaggagaaaagcgaagtgcatgtacttattgaacgcagcttaatgcgatta
aaagaggaagatcgtcaagtaccgcagatcgcgcggatgcgcgacttgctgtcccgaggt
atcggcgtgcatcacagtggtctactgcccatcgtcaaggagctagtggagctcttgttc
cagcgcaccctggtgaaagtcttgtttgccacagagacatttgccatgggtgtcaacatg
ccggcgcggtccgtggtgttctcgggtgtgcggaaaaatgacggcaacaaattccggaat
ctgcttccgggcgaatacacacagatggccggtcgtgcgggccgtcgtggtctggacaag
acaggcgttgtgattattctctccgacaatccagagctgaatccattgaatcgcatgatc
cttggtgagtcgactaagctcaagtcgcaattccgcatcacgtactgcatgattctgaat
cttcttcggatcgaaacactcaaagtcgaggacatgatcaagcgctctttctctgagaat
gcggcacagaaactaatgccgcaacatcagggacggctcaagaatctcgaacacaagctt
catgcttggacaaagaggctcgagtcctctgcctcattgccgattgacgctctttctcgt
ctgtatgacttgtcgaacaagctagtacgcgtgaacgacaacctcctagctctagcatat
gagcatccgcagggtgcgaagctcttctcttcaggtcgtgtcgttctcgtgtatacaggt
acacatatcttatctccagcaatgattgtgcggttggcatctaacaagaaattcctcgta
ctgcttgcggtgctaccagatcagcagccattggaaaagcaccaggcgccgttctgggta
acgtcgaagcttgccaaggacatggctcgtgacagtgaatatatgcctgagctccaagaa
gtttcgctatcaaagattgcttttgtctcgtctttctccgtgcctattcctgctactttg
ttccagtcccgacgtcaggcgaagctgcaacagggtcttgatctattgcgccccagcatt
gaacaaattcgcaatcacttggaagcagcaggcgatgaagcggcccgagccatcctggat
ctggaggctgactggtctcgtgtgcgacgcatcgacttccaggacacacagaaggatcgc
aatcagatcttgtctgagcttatacctgaacaaggcttgatgcagaagccaggtttcgat
aaggagttcaagcttcttaccatctgcaagttaactgaatgggagatggccaaagttagc
gcatccctgtcgaatcagaacttggagctcttgcccgactatcaccaacgtgtggacgtg
ctgaaggagctgcggttcatcgaccctgaatcagaaaccgttatgctgaaggggcgcatc
gcgtgcggtatccgcagtgtgaatgaactgatcatgacagagctgatccttgataacaca
ttcgtggactacgaaccacacgagattgctgcactcctcagtgtctttcacttccgcgaa
aacacgagtttgacgcccgaactgaacgacacgctccagaggggcttggaccacatctca
aagacagccgaccgcatcgcggctgtgcaaatggctcatcatctgcagccggaagacgac
gcttcgactttgcacacaggcctcgtggaagtcgtatatgagtggacgcgtggtttgcat
tttagtgacatcatgcagcttactgacgtcggcgagggaaccattgtccgatgtatcacg
cgacttgacgaaacattccgggaagtgcgtgaatgcgctagtgtgattggcaacgctcct
ctatatcaaaaaatggaaacctgtcaacagctagtcaggcgggatattgtctttgctgca
agtctctacttctag
DBGET
integrated database retrieval system
