KEGG   Myxine glutinosa (Atlantic hagfish): 137429559
Entry
137429559         CDS       T12065                                 
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2 isoform X1
  KO
K10755  replication factor C subunit 2/4
Organism
mglt  Myxine glutinosa (Atlantic hagfish)
Pathway
mglt03030  DNA replication
mglt03410  Base excision repair
mglt03420  Nucleotide excision repair
mglt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mglt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    137429559 (RFC2)
   03410 Base excision repair
    137429559 (RFC2)
   03420 Nucleotide excision repair
    137429559 (RFC2)
   03430 Mismatch repair
    137429559 (RFC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mglt03032]
    137429559 (RFC2)
   03036 Chromosome and associated proteins [BR:mglt03036]
    137429559 (RFC2)
   03400 DNA repair and recombination proteins [BR:mglt03400]
    137429559 (RFC2)
DNA replication proteins [BR:mglt03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    137429559 (RFC2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    137429559 (RFC2)
Chromosome and associated proteins [BR:mglt03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    137429559 (RFC2)
DNA repair and recombination proteins [BR:mglt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     137429559 (RFC2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    137429559 (RFC2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 nSTAND_NTPase5 AAA_14 Rad17 AAA_22 RCF1-5-like_lid AAA_lid_RFC1 Mg_chelatase AAA_16 Viral_helicase1 AAA_11 RuvB_N nSTAND3 AAA_19 AAA_assoc_2 AAA_18 AAA_5 AAA_24 AAA_25 MipZ ABC_tran AAA_28 SLFN-g3_helicase AAA_30 ATPase_2 MeaB FtsK_SpoIIIE AAA_RNF213_4 DNAX_ATPase_lid RNA_helicase ORC-CDC6-like MCM NTPase_1 AAA_23
Other DBs
NCBI-GeneID: 137429559
NCBI-ProteinID: XP_067975664
LinkDB
Position
6:5336117..5381377
AA seq 363 aa
MCAKDQAMEVELEMKEKMETTGEAMDVGRESSSHKDSVHAAVYELPWVEKYRPQKLSEVA
GNEETISRLEVFAREGNVPNIIIAGPPGTGKTTSILCLAHAMLGSAAKEAVLELNASNDR
GIDVVRNKIKMFAQQKVTLPQGRHKIIILDEADSMTEGAQQALRRTMEIYSKTTRFALAC
NNSEKIIEAIQSRCAVLRYGRLTDNQVLCRLTTVAEKESVPTTDDGLEAIIFTAQGDMRQ
ALNNLQSTYSGFGIVSSDNVFKVCDEPHPLLVKEMLQHCVNSNIDEAYKIMAHLWKLGYS
PEDIIGNVFRVCKTFHMAEYLKLEFIKEIGLTHMRIVEGVNSLLQMAGLLARLCQKTTCA
ESI
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgtgtgccaaggatcaagcgatggaggtagaattagaaatgaaagagaaaatggaaacg
acaggggaggcgatggatgtgggacgagagtcgtcatcacacaaggatagtgtccacgca
gcggtttatgagcttccgtgggtggagaaatatcgccctcagaaactgagtgaagttgct
ggaaacgaggagaccatcagccgccttgaggtttttgcaagagaaggaaatgttcccaac
ataatcattgcaggtccacctggcacaggtaaaacgacaagcatcctgtgtcttgcgcat
gctatgcttggttctgctgcgaaggaagctgtgcttgagctgaatgcctccaacgacaga
ggtattgacgtggtaagaaacaagatcaagatgtttgcccagcagaaggtcacgctacct
caaggtcgacacaagatcatcattctggatgaggctgacagcatgacggaaggagcccag
caagcccttcgacgtaccatggaaatttactccaagaccacacgctttgctcttgcctgc
aataactcagaaaaaataattgaagctatccagtctcgctgtgccgtgcttcgctatgga
cgtcttaccgacaaccaggtgctgtgccggctcacgaccgtggccgagaaggaatctgta
cccactacggatgatgggcttgaagcgataatatttacggctcaaggagacatgaggcag
gcactcaacaacctgcaatccacgtactctggattcggcatagtgagcagcgacaatgta
ttcaaggtgtgcgacgaacctcacccactgctcgtcaaagagatgcttcagcattgtgtc
aattccaacattgacgaagcgtacaagatcatggcacacttatggaagctcgggtattcg
ccggaggacatcatcgggaacgtgttcagagtgtgcaagacattccacatggcggagtac
ttgaagctcgaattcatcaaggagattggtttaacccacatgagaatcgtggagggcgtc
aactctctgctccaaatggccggcctacttgcacgtctttgtcaaaaaaccacttgtgcc
gaatcgatctga

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