Myxine glutinosa (Atlantic hagfish): 137431592
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Entry
137431592 CDS
T12065
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42 isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
mglt
Myxine glutinosa (Atlantic hagfish)
Pathway
mglt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mglt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137431592 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mglt03041
]
137431592 (DDX42)
Enzymes [BR:
mglt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137431592 (DDX42)
Spliceosome [BR:
mglt03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
137431592 (DDX42)
Complex B
137431592 (DDX42)
Complex C
U2 SnRNP specific factors
137431592 (DDX42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
137431592
NCBI-ProteinID:
XP_067979184
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All DBs
Position
7:complement(109682216..109808640)
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AA seq
868 aa
AA seq
DB search
MSDGLAARCCDGKLFLMMVLDRAGRKDATSKKEEIRWHMQNTDAMNWNKGGPGQKRGFGF
GGFTMSSKKEEPKLANPAHSVFLTGSTTGPMGRHQQPVHSSSFYKIGAKRPTFDDENAYF
DDDEDEASNTKYSDLPYIPAENSPSRIHEEGSDSEDDPLDAFMAKVESEAQKDMKSLESK
TGKQEIEKGVRDDIEEEDNQEAYFRYMEENPNAGVLLPEEEDDVEYDSDGNPIPPEKSKL
IDPLPLIDHSEIEYPPFDKNFYEEHEDVSSMSASQAQELRGKLNLRVSGAAPPKPCSSFG
HFGLDEQLMHQIRKSEFTQPTPIQCQGVPTALSGRDMIGIAKTGSGKTASFIWPMLVHIM
AQPELKLGDGPIGLICVPTRELCQQIHGECKRFGKAYNLHSVAVYGGGSMWEQAKALQEG
AEIVVCTPGRLIDHVKRKSTTLQRVTTLVFDEADRMFDMGFEYQVRSIAGHIRPDRQTLL
YSATFRSRIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILTGPSTKWAWILRRLVEFM
SSGSVLIFVTRKTNCEDLAKSLQQEGYMVGLLHGDMDQSERNKVISDFKKQIIPVLVATD
VAARGLDISSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGVAHTLMTSKDVNFAGDLVRN
LEGANQHVPRELMDLAMQNPKFRKTRFKGGGGRKPNIGGGGLGYRERPGLGLESPASASG
AANSCNLQSGFEASHPSLGAMGERISSMREAFQAQYRSQFVAASATSDSANKGNFGWKSA
GSLHIIPSGCPGPRSGFQSAGVLQTVPSIASPPPIISPPPITNPPPTINPPSNVVEKPKE
KPNEKIKNKDGFAVPVDPPRRKKTRWDN
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatggattggcagccagatgctgcgacggcaagttgttcctcatgatggtcctg
gatcgggcaggaagaaaagatgcaacgagcaaaaaggaagagatacggtggcacatgcaa
aacacagacgcaatgaactggaacaaaggaggacctgggcagaagcgcggctttggtttt
ggtggcttcaccatgtcgagtaagaaggaagagccgaagttggctaaccctgcacactct
gtgttcctaacgggctcaaccactggcccaatgggtcgtcatcagcaaccagtacatagc
tcttccttctacaaaattggagccaaacgtcctacctttgacgatgaaaatgcgtatttt
gacgatgatgaagatgaagcctctaatacaaagtactcggatctaccttacattccggcc
gagaactcaccctctcgcattcacgaggaaggttcggacagtgaagatgatccattggat
gcctttatggctaaagttgagtcagaggctcagaaagacatgaaatctctggagagcaag
accggaaagcaagaaattgaaaagggtgttcgagacgacattgaagaggaggataatcaa
gaggcctatttccgttacatggaggagaacccaaatgctggtgtattgctgccagaagaa
gaagatgatgttgagtatgatagtgatggtaatcccatcccaccagagaagagcaaactg
attgatccactccctcttattgaccactcggagatcgaataccctccttttgataagaat
ttctatgaagaacatgaagatgtttcctccatgtcagcttcccaagcacaggagctacga
gggaaactaaatctgagggtttctggtgcagccccacccaagccatgctccagcttcggg
cactttgggttggatgagcagttgatgcaccaaattcgcaagtctgagtttacacaaccg
acaccaatccagtgccagggtgtgcccacagccttaagtggcagggacatgatcggcatt
gcaaagactggcagcggcaagactgcatccttcatctggcccatgctggttcacataatg
gctcaaccagagctaaaactgggggatggccccattggcctgatctgtgttccaaccagg
gaactttgccagcagatccatggcgagtgcaaacgcttcggcaaggcgtacaatctgcat
tctgttgctgtttatggcggaggcagcatgtgggagcaagcaaaggccttgcaagaggga
gcagaaatcgtcgtgtgcacaccgggccgtctcattgaccacgttaaaaggaagtcaaca
acgcttcaaagggttactaccttggtttttgatgaagccgaccgcatgtttgacatggga
tttgaataccaggtacgctctatcgctggtcacattcgacccgatcggcaaactctgctg
tacagtgctacattcaggagtaggattgagaaacttgcccgagacattctcatcgatccc
atccgtgtggtgcaaggagacattggtgaagccaacgaggatgtgacacagattgtggag
atacttacgggaccatccaccaagtgggcatggatcttgcgacgtcttgtcgagttcatg
tcctctggtagtgtgctcatctttgtgacacgaaaaaccaattgtgaggatctggccaag
agtttgcagcaggaaggatatatggtgggcttgctgcatggagatatggaccagagtgaa
cgaaacaaggtcatctcagacttcaagaagcagataatacctgtgcttgtggcaaccgac
gttgctgctcgaggcctggacatctcatcaatccgtactgtcgtgaattacgatgtggct
cgggacattgatacacatacacaccgcattggccggacaggaagggcaggtgagaagggc
gttgcacacacgcttatgaccagcaaggatgtcaattttgctggagatttggtgcgaaat
ttggaaggagcgaaccagcatgtcccccgagagctgatggatttggctatgcagaatcca
aagtttaggaaaaccagattcaagggtgggggaggcagaaagcccaacattggtgggggt
ggacttgggtatcgtgagcgtcctggtcttggtctggagtctcctgcctctgcttctggt
gcagcaaatagctgcaatttgcagagtggatttgaggcttctcatccatcattgggtgcc
atgggggagcgtataagctcaatgcgtgaagccttccaggcacaataccggtcacagttt
gtggcagcaagtgcaacatctgatagtgcaaacaagggaaactttggctggaagagtgct
gggagcctgcatatcataccctccggttgtcctggacctcgaagtggcttccagagtgca
ggggttcttcagacggtaccgtcaatagccagcccgccgccaataataagcccaccacca
ataaccaaccctccgccaacaatcaacccgccgtcaaatgttgtcgaaaaacccaaagaa
aagccaaatgaaaaaattaaaaacaaagatggttttgctgtgcctgtagatccgccccgc
cgtaagaaaacgagatgggataactga
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