Mycoplasmopsis glycophila: NCTC10194_00177
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Entry
NCTC10194_00177 CDS
T06765
Symbol
rnjB
Name
(GenBank) hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mgly
Mycoplasmopsis glycophila
Pathway
mgly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10194_00177 (rnjB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgly03019
]
NCTC10194_00177 (rnjB)
Messenger RNA biogenesis [BR:
mgly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC10194_00177 (rnjB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Motif
Other DBs
NCBI-ProteinID:
VEU70176
UniProt:
A0A449AUK4
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All DBs
Position
1:240999..242666
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AA seq
555 aa
AA seq
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MNKKNQENINIFALGGQDENGKNCYVFEYGNDIFIINAGVKIPINSQNGVDTLIPDFSYL
EKNKNRIKAIFISDVKNESFSALPWLVMKIPGIKIYTSLFNKILIYERLNKYNISEHNYK
IITFSKPLKHHHLIIEPLELAGSMPGNLGFNFNTGSGNYLFMFNYTIGNLGIYGKTDLQF
LKNYFQNRKITALITDAGKSNIAGYSIDKFNQSKQLIEAFKTTDSNHRIIVGAYDEEMPA
LKQVLDLAILHNRPVVAYGKTYAQLLRFIIKDNPNLSLPEIIDYRNLAKHDNAVILVTGS
IDRLYLRFLRITDHKDVYLKLHQTDTIVMLAPPVNGLESLAALTLDEIAKIAPKLYDVLD
NEYFRPRPTRLDLLKLILELKPEYFIPTQGLYRYLVDSSNFILGNKEAKKTTLPIILLNG
KVAHFMDNKLFSLNGKIKEVGDTIIDGFGVGDISSEVINEREALGREGVVIINGLYCPKT
KRILGQLHINYVGVIDLTEQDKIDQLIKSVIAEIFETKEFTSMRELNEKIRKSIRKKIFK
LTDKDPMVALTLTTI
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaaaaccaagagaatatcaatatttttgccttgggcggacaagacgagaat
ggtaaaaattgctatgtttttgaatatggtaatgatatttttattattaatgctggggtt
aaaattccaattaattcacaaaatggggttgacaccttaattcctgatttttcctattta
gaaaaaaacaaaaataggatcaaggctatttttatttcagacgtaaaaaatgaatctttt
agtgcccttccatgacttgtgatgaaaattccaggtattaaaatttatacttcattattt
aataaaattttaatttatgaaagattaaacaaatacaacatttcagaacataattacaaa
ataattacttttagtaaaccgctgaaacaccatcacttaattatcgaaccacttgaactt
gcgggaagtatgcctggtaatttaggttttaatttcaatacaggaagtggaaattatctt
tttatgttcaattatacaatcggtaatttaggaatttatggtaaaacagatttacaattt
ctcaaaaattattttcaaaatcgtaaaatcacagctttaatcactgatgctggtaaaagt
aatattgcaggttattcaattgataaatttaatcaatcaaaacaacttattgaagcattt
aaaacaactgattcaaaccatcgcattattgttggtgcatacgacgaagaaatgccagct
ttaaagcaagttttagatttagctattttacataatcgtccagttgttgcatatggaaaa
acatatgcacagcttcttcgtttcattattaaagataatccaaatttatcattacctgaa
attattgattatcgtaatcttgcaaagcatgataatgctgttattttagtaactggttca
atcgatcgtttatatcttagatttttaagaattacagatcataaagatgtttatttaaag
ttacatcaaactgatacaatcgttatgcttgcgccacctgttaatggattagaatcatta
gcagctcttacacttgatgaaattgcgaaaatagcaccaaaactttatgatgttttagac
aatgaatattttagaccaagaccaacacgtcttgatttgcttaaacttattttagaatta
aaaccagaatacttcattcctactcaaggtctttatcgttatttagttgattcatctaac
tttattttaggaaacaaagaagctaaaaaaactactttaccaattattttattaaatggt
aaagtagctcactttatggacaataaactatttagtttaaatggaaaaattaaggaagtt
ggagacactatcatcgatggatttggagttggtgatatttcaagtgaagttattaatgaa
agagaagcattaggacgtgaaggcgttgtaattattaatggtttatactgtcctaaaaca
aagcgtattttaggccaactacacataaattatgttggagtaattgatcttactgaacaa
gacaaaattgatcagttaattaaatctgtgattgctgaaatttttgaaacaaaagagttt
acatcaatgcgtgaactaaatgaaaaaattcgtaagtcaatccggaaaaagatttttaaa
cttactgacaaagacccaatggttgcacttactttaacgacaatttaa
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