Mycoplasmopsis glycophila: NCTC10194_00672
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Entry
NCTC10194_00672 CDS
T06765
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mgly
Mycoplasmopsis glycophila
Pathway
mgly03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mgly00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC10194_00672 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgly03021
]
NCTC10194_00672 (rpoC)
03400 DNA repair and recombination proteins [BR:
mgly03400
]
NCTC10194_00672 (rpoC)
Enzymes [BR:
mgly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC10194_00672 (rpoC)
Transcription machinery [BR:
mgly03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC10194_00672 (rpoC)
DNA repair and recombination proteins [BR:
mgly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC10194_00672 (rpoC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
VEU71068
UniProt:
A0A449AWG0
LinkDB
All DBs
Position
1:complement(835726..840159)
Genome browser
AA seq
1477 aa
AA seq
DB search
MNNFNNNDPKDISKLINKITLSLATNDDILEWSNGEVKKPETINYKSYKPEKDGLFDELI
FGPTTDYKCPVCGTKYKKSDENLICSKTPACEKYKPQILPKITRRSRMGHIKLHNPVVHF
WFFKIDHSIISKLLGLRVHDSNKQVTKADLEKLIYYKSHIVLDSGELKSLKKNTIIDIND
AANIYEAALEEMLNNYEKDTDEYEDIETALNELRDYAVSKIGKDFGIDFYQYNDIIHEYS
NAKIGTGSQSIAYLLENINLEEEALAVQAEIDIINSQGEDEGLTSTKIQDRQKLYKRLTV
INSFIKSGQKPTSMLIYNLPVIPADLRPLVQLDGGRHSTSDVNELYRRIIIRNNRLEKWN
ESDAPMLIKQNEYRMIQEAVDALIDNARKKPSPVTSKDSHPLKSISDALTGKKGRFRQNL
LGKRVDYSGRSVIVVGPTLKMYEVGIPRDMAAKLFEPWIIKELIKGEESITSVKSAKKLI
ENLNPIIWPYVEKAIDGRPVLLNRAPTLHRLSIQAFQPVLIRGKAIKLHPLVTTAFNADF
DGDQMAVHVPISDQAVREAKELMLASKNILGPKDGEPIINPSQDMILGLYYLTIEKAGAK
GEGNFYANYDDMMLAYERGYITLHTRVVLPVKSLNKESISSNTSEPYLISTVGKFILNNA
FPTDFPFVFGKYVSVNYKTNPDGSVKTIEKEMIHTSEHDLDRYTLPYGANFKEEIANMQP
NLALTKKDIAKIVRKVYENYVAVVTMEDIAEVIQNVTQINYEDNFQECAELIDYKGEQIS
TSHARIINKLIKEAFSRLAFNTPKNQLPESFQWDVDQYTKALDDVWFNYSNYVASILDKI
KNLGFAFSTISGTTISMNDITTLETTKEKIQKGEKYIDELKKFFENGWLTDDERYNLVIQ
KWTEVKDSIEKDLKEVTKSDLDNPLFMMFTSGARGNSSNFTQLAGMRGLMQNNTKVLKAD
AENDRVVRSTVEIPVKSSFLDGLSAYEFYSSTHGARKGLTDTALNTAKSGYLTRRLVDVA
QGIVVREEDCGSDFGFVVKDIKDTKTDTVIESLTERIEGRFTNSAILDDQGNVVVEGNTF
ITPEIANKIVNEYGKKEVEIRSVLSCHTKNGVCKRCYGKDLASNRIVNIGEAVGVVAAQS
IGEPGTQLTMRTFHTGGVAGVEDITGGFGRLIELIDAYDFPWGRPAIISKVYGTVTSIVP
AKDKSGKDTDVMLVTIETQVNAKQKENIIESGKVSQKLRVKVGDRVVPGQKIFEGPVILN
DLLKYADTRAVQNYLLKEVQRLYRLQGITISDKYIEIIIRQMLSKIMITDPGDSNFFTGS
LVDTFVYQRENGKLLAQGKRPAFGEVKIRGAKQTPLLSDSFLAAASYQETAKILVNSSIA
KRVDHLEGLKENIILGLKIPAGTNSNFELKGKYDIRDPRSYFAPMAYSNNNETFEPMELM
DFEELTENGEYYDQIDEMSNLQYDMDDVSYDGMEDFD
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttcaataacaatgatccaaaagacattagtaaattaatcaataagattact
ttatcattagcaacaaatgatgatattttagaatgatctaatggagaggttaaaaaacct
gaaacaattaactataaatcttataaaccagaaaaagatggattatttgatgaattaatt
ttcggtcctacaacagactataaatgtcctgtttgtggtactaaatacaaaaaaagtgat
gaaaatttaatttgttctaaaactcctgcttgtgaaaagtataaacctcaaattcttcca
aaaattacacgtagaagtagaatgggacacattaaattacacaacccagttgttcacttc
tgattcttcaaaattgatcactcaattatttcaaaacttttaggtttaagagtccacgat
tcaaataaacaagtaactaaagcggatttagaaaaattaatttactataaatcacacatt
gttttagatagtggagaattaaaatcattaaagaaaaatacaattattgacattaacgac
gctgctaatatttatgaagctgcattagaagaaatgttaaataattatgaaaaagacaca
gacgaatatgaagatatcgaaacagctttaaatgaacttagagattatgctgtttctaaa
atcgggaaagatttcgggattgatttttatcaatacaacgatatcattcacgaatattca
aatgctaaaattggaacaggttcacagtcaattgcttatcttttagaaaatattaattta
gaagaagaagcacttgctgttcaagcggaaattgatattatcaattcacaaggtgaagat
gaaggattaacttcaactaaaattcaagatcgtcaaaaactttacaaacgtttaacagtt
attaactcatttattaaatcaggtcaaaaaccaacaagtatgcttatttacaacttacct
gttattcctgctgatttacgtccacttgttcaacttgatggtggaagacactcaacaagt
gatgttaatgaactttaccgtcgtattattatcagaaacaatcgtttagaaaaatgaaat
gaatcagatgctccaatgcttatcaaacaaaatgagtatcgtatgattcaagaagctgtt
gatgctttaatcgataatgcacgtaaaaaaccatcaccagttacatcaaaagactcacat
cctttaaaatcaatttcagacgcccttacaggtaaaaaaggacgtttccgtcaaaacctt
ttaggaaaacgtgttgactattcaggacgtagtgttattgttgttgggccaactttaaaa
atgtatgaagtaggtatcccaagagatatggctgccaaacttttcgaaccttgaattatt
aaagaattaattaaaggtgaagaaagtattactagtgtaaaatcagctaaaaaattaatt
gaaaaccttaacccaattatttgaccatacgttgaaaaagcaatcgatggaagaccagtt
cttttaaaccgtgctcctacattgcaccgtctttcaattcaagctttccaaccagtttta
attcgtggtaaagcaattaaattacacccacttgtaactacagctttcaacgctgacttc
gacggggatcaaatggctgttcacgttccaatttcagatcaagctgttcgtgaagctaaa
gagttaatgttagcttcaaaaaacattttaggaccaaaagatggagaacctatcattaac
ccttcacaggatatgattttaggtctttactacttaacaattgaaaaagctggagccaaa
ggtgaaggtaacttctatgcaaactatgatgatatgatgttagcttacgaaagaggctac
attacacttcatacacgtgtagttttacctgttaaatcattaaataaagaatctatttca
tcaaatacaagtgagccatacttaatttcaactgttggtaaatttattcttaataatgct
ttccctactgatttcccatttgtttttggtaaatacgtttctgtaaattacaaaacaaat
ccagatggatcagttaaaactattgaaaaagaaatgattcatacttcagaacatgatttg
gatagatacactctaccatatggagcgaactttaaagaagaaattgctaatatgcaacca
aatcttgctctaactaaaaaagatatcgctaaaattgttcgtaaagtatatgaaaactat
gttgctgttgtaacaatggaagatattgctgaagtaatccaaaacgttactcaaattaac
tatgaagataacttccaagaatgtgcagaattaattgattataaaggcgagcaaatttca
acctcacatgcaagaatcatcaacaagttaattaaagaagcattctcaagattagctttc
aacactcctaaaaatcaattacctgaaagtttccaatgagacgttgatcaatatactaaa
gcacttgatgatgtttgatttaactacagtaactatgttgcatcaattttagataaaatc
aaaaaccttggatttgccttttcaacaatttcgggtacaacaatttcgatgaacgatatt
actacacttgaaacaactaaagaaaaaattcaaaaaggtgaaaaatatatcgatgaactt
aagaaattcttcgaaaatggttgattaacagatgatgaacgttataacttagttattcaa
aaatgaacagaagttaaagattcgattgaaaaagatcttaaagaagttacaaaatcagat
ttagataacccattatttatgatgttcacctcaggagcacgtggaaactcatctaacttt
acacagcttgctggtatgcgtggacttatgcaaaacaacaccaaagtacttaaagccgat
gcggaaaacgaccgtgttgttcgtagtactgttgaaattcctgttaaatcttcattcctt
gatggacttagtgcatatgaattctattcatcaacccacggggctagaaagggacttaca
gatactgcgcttaacactgctaaatcaggatacttaacacgtagattagttgacgttgcg
caaggtattgttgtacgtgaagaagattgtggcagtgactttggttttgtagttaaagat
attaaagatacaaaaactgatacagttattgaatcgcttaccgaaagaattgaaggtaga
tttactaactcagctattttagatgatcaaggaaatgttgttgttgaaggtaacacattc
attacacctgaaattgctaacaaaatcgtgaatgaatacggtaaaaaagaagttgaaatt
cgttcagtgctttcatgtcatactaaaaacggagtatgtaaacgttgctacggaaaagac
cttgcttcaaaccgtattgttaacatcggtgaagctgttggggttgttgcggctcaaagt
attggggaacctggaacccagcttaccatgcgtacattccacaccggaggggttgctggg
gtagaagatattacaggtgggttcggtagacttatcgagcttatcgatgcttacgatttc
ccatgaggacgtcctgcaattatttctaaagtttatggaacagttacatcaattgtgcct
gctaaagataagtcaggaaaagatacagatgtaatgcttgttacaattgaaactcaagtt
aatgcaaaacaaaaagaaaacattatcgaaagtggtaaagtttcacaaaaacttagagtt
aaagttggtgacagagttgtacctggacaaaaaatctttgaaggaccagttatccttaac
gatttacttaaatatgcagatactcgtgctgttcaaaattacttattaaaagaagttcaa
cgtttataccgtttacaaggtattacaatttcagataaatatattgaaatcattattcgt
caaatgctttcaaaaattatgattacagatccaggagactctaacttcttcacaggaagt
cttgttgatacttttgtatatcaaagagaaaatggaaaattacttgctcaaggtaaaaga
cctgcctttggtgaagttaagattagaggggctaaacaaacgccattacttagtgactca
ttccttgctgctgcttcatatcaagaaacagctaagatcttagttaacagttctatcgca
aaacgtgtagaccaccttgaaggacttaaagaaaacattatccttggacttaaaattcct
gctggaactaactcaaactttgagttaaaaggtaaatacgacattagagatccaagatca
tactttgctccaatggcatattcaaacaataacgaaacttttgaaccaatggaattaatg
gatttcgaagaacttacagaaaatggtgaatactacgatcaaatcgatgaaatgtctaat
ttacaatacgacatggacgatgtttcatacgatggaatggaagatttcgattaa
DBGET
integrated database retrieval system
