Magnetococcus marinus: Mmc1_0473
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Entry
Mmc1_0473 CDS
T00427
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
mgm
Magnetococcus marinus
Pathway
mgm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Mmc1_0473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgm03400
]
Mmc1_0473
Enzymes [BR:
mgm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mmc1_0473
DNA repair and recombination proteins [BR:
mgm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mmc1_0473
RecFOR pathway proteins
Mmc1_0473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
AAA_3
nSTAND3
Mg_chelatase
AAA_22
TIP49
Rad17
TsaE
AAA_2
AAA_18
NB-ARC
Bac_DnaA
NACHT
AAA_33
AAA_17
Arg_tRNA_synt_N
AAA_14
RNA_helicase
NTPase_1
Resolvase
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ABK42998
UniProt:
A0L4V5
LinkDB
All DBs
Position
complement(571532..572563)
Genome browser
AA seq
343 aa
AA seq
DB search
MEEMASRMISGDPELGEPFQENGLRPKYLKEFVGQKPLKANLTVFLHAAKQRAEAIDHIL
LHGPPGLGKTTMAQIIAWEMGVGLRSTSGPVIDKAGDLAALLTNLNPGDVLFVDEIHRLS
PAVEEILYPAMEDFQLDLMIGEGPSARSVKIDLPRFTLVGATTRAGMLTSPLRDRFGILA
RMQFYEPDELQQIVTRSASIMGIDISADGAFEIARRSRGTPRIANRLLRRVRDFAQVAGP
GYIDKDLADRALLALEVDRNGLDNMDHRLLKALLDKFAGGPVGLDTLAAAIGEERSTIED
VIEPYLILQGMLDRTPRGRKATHASYTAMGRTAPRPVQQGTLL
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggaagagatggcttcccgtatgatttcgggagatcctgagcttggcgaaccgttccag
gagaatggtctgcgccccaaatacctcaaagagtttgtcggtcaaaagccgctcaaggca
aacctcaccgtctttctacacgccgccaaacagcgtgccgaagccattgaccatattctg
ctgcacggcccccccggtttgggtaaaaccactatggcccagattatcgcctgggagatg
ggcgtggggttgcgctcaacctcaggaccggtgattgataaagcgggggatctggccgcc
ctgctcaccaaccttaatcccggagatgtgctgtttgtggatgagatccaccgcctcagc
cccgccgtggaggagatcctctaccccgccatggaggattttcagctcgatcttatgatt
ggcgaagggccctcggcccgctctgtcaagatcgacctgccccgctttaccctggtgggt
gccaccacccgcgcaggcatgctcaccagccccctacgcgaccgctttggcatcctagcc
cgcatgcagttttatgaacccgatgaactccaacagattgtcacccgctctgcctcgatc
atgggcatcgacatttcagcggatggtgcctttgagatcgcccgccgctcccgtggcacc
ccgcgtattgccaatcgcctgctgcgccgggtgcgtgactttgcccaagtggccggacct
ggctacattgataaagatcttgccgaccgtgccttgctggctttggaggtcgatcgtaat
ggcttggacaatatggaccatcgcttgcttaaagccttgttggataagtttgcgggtggc
ccggtggggctggataccttggcggcggccattggtgaggagcgctccaccattgaggat
gtcatcgagccttacctgatcctacagggtatgctggaccgcacccccaggggtcgcaaa
gccacccacgccagctacacagccatgggccgcacagcgccgcgacccgtgcaacagggt
acgctgctatga
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