Magnetococcus marinus: Mmc1_0805
Help
Entry
Mmc1_0805 CDS
T00427
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
mgm
Magnetococcus marinus
Pathway
mgm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mgm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Mmc1_0805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgm03021
]
Mmc1_0805
Transcription machinery [BR:
mgm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mmc1_0805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
DUF5098
DnaD_N
Motif
Other DBs
NCBI-ProteinID:
ABK43324
UniProt:
A0L5T1
LinkDB
All DBs
Position
complement(1004964..1007015)
Genome browser
AA seq
683 aa
AA seq
DB search
MDGKSNMAEDTKREDMKKLIARGKERGFLTYDEVNDVLPNDMTSAEDMEDVVGLLDNMGI
DLIDDEREEGARPKSRPAAGIGNLDSLDDDVDEEILGISDFDSEDDESDDEDGLRSDGAI
EDIDLGKTDDPVRMYLREMGSVELLTREGEIAIAKRIEEGCNEVIATICDAPSTFNEVMM
LAERLRAGEISLREVLDISTPQDEGSEDEDLNNDDDEVEASTESDDEDVDEDDIVNGPVK
VRNPVPEPPPVKTEEEIAAQREADNEQFRELYEATLAIFDEITRENEVLVELRDPLNDAL
QNDPEGETCKRLLAEYQAHKARIVEIVAGIKFSPKQRDRLVERIKSYVAAVRAQEQKIIT
IVTQCNVKKPEFIEQFTGNESDTTWIQNFAKTRSAPWKRLYEQSELICEAQLVIRSIEEE
AGQTVADLKKCNKKLMDGERRANQAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNI
GLMKAVDKFEWRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLVRTSRQM
VQEMGREPTPEEIAERMSMSLEKVRKVLKIAKEPISLETPVGDEEDSHLGDFIEDKSMLS
PSEHAIMSNLRDTTGRVLQTLTSREEHVLRMRFGIGLPTDHTLEEVGKQFNVTRERIRQI
EAKALRKLRHPTRSRKLRSFLES
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggacggaaaaagtaacatggccgaggataccaaacgcgaagacatgaaaaagctcatc
gcccgtggcaaagagcggggatttttgacctatgatgaggtcaacgatgtgctacccaat
gacatgacctctgcggaggatatggaagatgttgttggtctcctagacaacatgggcatc
gatcttattgatgatgaacgagaagaaggggcgcgtccgaagagccgcccagcagccggt
atcggcaatctcgacagtctagatgacgatgttgatgaggagattcttggcatctccgac
tttgatagcgaggatgatgagagtgacgatgaagatggcctgcgcagtgatggtgccatc
gaagatatcgacttaggcaagactgatgatcctgtacgcatgtatttgcgtgagatgggc
tccgttgagttgctgacccgtgagggtgagatcgccattgccaagcgaattgaggaaggc
tgcaatgaggtgattgccaccatctgcgatgcaccttccacgtttaacgaagtgatgatg
ctggctgagcggttgcgggccggtgagatttcactgcgggaggtgctggacatctccacg
ccccaagatgaggggagtgaggacgaggatctcaacaacgacgatgatgaggttgaggcc
agcaccgagagcgatgatgaagatgtggatgaggatgatatcgtcaacgggcctgtcaag
gtgcgcaatccggtaccagagcctcccccggttaagaccgaggaggagattgcggcccag
cgggaggcggataatgagcaatttcgtgagctttacgaggccacattagccatctttgac
gaaattacccgtgaaaatgaggtattggtagagctgcgggatccgctgaacgatgctttg
cagaatgatcctgagggggaaacctgcaaacggctgctggcggagtatcaagcgcacaag
gcacggattgtggagattgtcgcgggcattaagttttcgcccaagcagcgggatcggctg
gttgagcgcattaagagctacgtggctgcggtgcgcgcgcaggagcagaagattatcacc
attgtgacccagtgtaatgtcaaaaagcccgagtttattgagcagtttacgggcaatgag
agtgacacgacctggatacaaaactttgccaagacgcgcagtgcaccgtggaagcggctt
tatgagcagtctgagctcatctgcgaagcgcagttggttattcgcagcattgaggaagag
gctggtcaaacggttgcggatttgaaaaagtgcaacaagaagttgatggatggtgagcgg
cgtgccaatcaggccaagaaggagatggtggaagccaacttgcgtctggtgatttccatt
gccaagaagtataccaaccggggtttgcaatttttggatttaatccaagagggcaacatt
ggtttgatgaaggcggtggataagtttgagtggcgtcggggttacaagttttctacctat
gctacgtggtggattcgtcaggcgattacccgttctattgcggatcaggcgcgcaccata
cgtattccggtgcatatgattgagaccattaacaagctggtacgcaccagccgtcagatg
gtgcaggagatgggccgcgagcccacgccggaagagattgctgagcgcatgagcatgagt
ttggagaaggtgcgcaaggtattgaagattgccaaggagccgatctctttggagacacct
gtaggggatgaagaggactcccatttgggagacttcattgaggacaagtccatgctatcg
ccatcggagcatgcgattatgtctaatttgcgggatacgacggggcgggtattgcagacg
ttgaccagtcgcgaggagcatgttttgcgcatgcgctttggtattggtctgccgacggat
cacacgttggaggaggtgggtaagcagtttaatgttacccgtgagcgtattcgtcaaatt
gaggctaaagcacttcgcaagttgcgtcatccgacgcgttcgcgtaaactgcgcagcttc
ttggagtcataa
DBGET
integrated database retrieval system
