Magnetococcus marinus: Mmc1_1244
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Entry
Mmc1_1244 CDS
T00427
Name
(GenBank) histone family protein DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
mgm
Magnetococcus marinus
Brite
KEGG Orthology (KO) [BR:
mgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgm03032
]
Mmc1_1244
03036 Chromosome and associated proteins [BR:
mgm03036
]
Mmc1_1244
03400 DNA repair and recombination proteins [BR:
mgm03400
]
Mmc1_1244
DNA replication proteins [BR:
mgm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Mmc1_1244
Chromosome and associated proteins [BR:
mgm03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Mmc1_1244
DNA repair and recombination proteins [BR:
mgm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Mmc1_1244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Phage_cement_2
DUF7406
Motif
Other DBs
NCBI-ProteinID:
ABK43755
UniProt:
A0L712
LinkDB
All DBs
Position
complement(1543200..1543475)
Genome browser
AA seq
91 aa
AA seq
DB search
MTKSELILTIAAQKGLTKQYAAMVVDLVFSELGKALAKGERVELRGFGVFEPRARKPRAA
RNPKTGEKVAVESKTAVHFKPGLDMRKRVDY
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatctgaactcattctcactattgccgcgcaaaaaggcttaaccaagcaatac
gcagctatggtcgtcgacctcgtttttagtgaactcggcaaggctttagccaaaggggaa
agagttgagcttcgaggctttggcgtatttgagccgagagccaggaagccgcgtgctgcg
cgcaatcccaaaactggtgaaaaagtagctgttgagtccaaaacggctgtgcacttcaag
cctgggctggatatgcgcaagcgcgtagactactga
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