Magnetococcus marinus: Mmc1_1641
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Entry
Mmc1_1641 CDS
T00427
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mgm
Magnetococcus marinus
Pathway
mgm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mmc1_1641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgm03019
]
Mmc1_1641
Enzymes [BR:
mgm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mmc1_1641
Messenger RNA biogenesis [BR:
mgm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mmc1_1641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
AAA_22
P-loop_SecA
ssDNA-exonuc_C
Motif
Other DBs
NCBI-ProteinID:
ABK44150
UniProt:
A0L857
LinkDB
All DBs
Position
complement(2037469..2038788)
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AA seq
439 aa
AA seq
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MSDFASLNLVKPLLNALTQAGYTTPTPIQAQAIPHLLAGRDLLGIAQTGTGKTAAFALPI
LNKLSQIKGRPAPNAPRALILTPTRELASQIGNSIAVYGKHVPTTHTVVFGGVGKQPQIR
ALSRGVDILVATPGRLLDLMGERHVRLDQIQVFVLDEADRMLDMGFIHDIRRIIKVIPAK
RHTLLFSATMPKDIAELAEGLLTNPAKVEVTPESTTVERITQKVLFVDKQNKRSLLKNVL
EHESIEQVLVFTRTKHGANRVAEYLDKHRIASAAIHGNKSQSAREKALDGFRKGKLKVLV
ATDIAARGIDVAGISHVINFDLPNESESYVHRIGRTARAGRDGNAISFCDAEERGYLLDI
EKTIRQTVPVDIDHEFHCEVVANAAPIKPSRKRSSGHGAGGGNPHGGGHRRGNPSTASKP
RQHSGRRTPSSKGRSGSVA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgattttgcttcgttgaatcttgttaaacccctccttaatgccttaactcaagct
ggttacaccaccccaacccccattcaagcacaggctattccgcatctgttggcaggtcgg
gatctgctgggcattgcccagaccgggacaggtaaaaccgcagcttttgcactacccata
ctcaataagttgagccaaattaaaggtcgccccgcgcccaatgcgccccgcgccttgatc
cttaccccaacccgtgagctcgcttcacaaatcggcaacagcatcgccgtttatggtaag
catgtgccaaccacccacaccgttgtatttggtggcgtgggcaaacagccacagattcgc
gccctctcccgtggcgttgatattttggtcgctacccctggccgcttactggatcttatg
ggggagcgccatgttcgcctggatcagattcaggtttttgtactggatgaggccgaccgc
atgctggacatgggctttatccatgatatccgtcgcatcattaaggtgatcccagctaag
cgccatacgctgctcttttctgccaccatgcccaaggatattgcagagctggcagagggc
ttattgaccaatcccgccaaggttgaggtcacgccagaatccacgacggttgagcgtatt
acgcaaaaggtgctgtttgtcgataaacagaacaagcgttctttgctcaaaaatgtgctt
gagcatgagtctattgagcaggttttggtctttacccgcaccaagcatggggccaaccgg
gtggcggagtatcttgacaaacaccgcattgcctctgcggcgattcatggcaacaaatcc
caaagcgcccgcgaaaaggcactggatggctttcgcaaaggcaagttaaaggttttggta
gcgacagatattgcggcgcggggaattgatgtggcgggcattagccacgtgatcaatttt
gacctgcccaatgagtcggaaagctacgtgcaccgcataggccgcacagcgcgcgctggg
cgggatggcaatgccatctctttttgcgatgctgaagagcgcggctatctgctggatatt
gaaaagaccatccgccagaccgtgccggttgatattgaccatgaattccattgcgaagtg
gttgccaacgcagccccaatcaaacccagccgcaaacgcagcagcggccatggtgccggt
ggtggcaatccccatggtgggggacatcgtcgcggcaaccccagtaccgccagcaaacca
cgtcagcatagcggacgtcgcaccccatccagcaagggtcgtagcggtagcgtagcgtaa
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