Magnetococcus marinus: Mmc1_3660
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Entry
Mmc1_3660 CDS
T00427
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mgm
Magnetococcus marinus
Brite
KEGG Orthology (KO) [BR:
mgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgm03032
]
Mmc1_3660
03400 DNA repair and recombination proteins [BR:
mgm03400
]
Mmc1_3660
Enzymes [BR:
mgm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Mmc1_3660
DNA replication proteins [BR:
mgm03032
]
Prokaryotic type
DNA Topoisomerases
Mmc1_3660
DNA repair and recombination proteins [BR:
mgm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mmc1_3660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Phage_zn_bind_8
Toprim_4
Toprim_2
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
ABK46145
UniProt:
A0LDV2
LinkDB
All DBs
Position
complement(4596615..4598966)
Genome browser
AA seq
783 aa
AA seq
DB search
MTAVVIVESPAKAKTINKFLGRGYKVVATYGHIRDLPSKNGSVDTEHGFAMKYSVPKDST
KRVDELAKAVKGAEQVLLATDPDREGEAISWHVYEVLNEKKLLENVQVKRVVFHEITKTA
IQDAVAHARDVDMDMVNAQQARRALDYLVGFNLSPLLWRKVRRGLSAGRVQSVALRLVCE
REAEIQAFEAREYWSITALAAQAAQSAPRPFEARLAVADGEKLSKFSIGDEAYAKRLIKA
VEKRPLYVSEIEKKQSKRNPAPPFITSTLQQEASRKLGFSAKKTMTVAQRLYEGMEVPTA
DGGKETVGLISYMRTDSVNLANEAIESIRKQIEIRYGKEYLPKSPRKYKSSAKNAQEAHE
AIRPTDVIRTPEMLREILEKDQFRLYELIWKRTVACQMAQAKIDKVAANLSVDSQDPNAA
YRFRATGSSVAFAGFMKVYMEGKDEVSAQDREDDDDDNESILPPLEVGQQLEQKSLDARQ
HFTEPPPRYTEATLVKVLESYGIGRPSTYAPTMSTLQDRGYVKLDARKFYPEDVGMVVNS
YLTKHFSTYVDYNFTANLEDQLDAVSRGEKSWVPLMEDFWQPFIQQITLKDETTSKEEVT
TEQIDEPCPKCGAPLSIKLGRFGKFKACTGYPECKHTEPLNKEEEVSRPEPELTDIPCDK
CGKPMLIKEGRYGKYYGCSGAPECKNNQPLNKPRDTGVACPSCGQGTFLEKKSRRGKIFY
SCSNYPKCKQALWDEPLEIPCPKCQAPFVTKKVTKTRGTEHICVAEGCDYKEVVEAPIKT
SKQ
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgacggcagtggtcatcgtggaatcacccgccaaggcgaaaaccatcaataaattcctg
ggtcgtggctataaagtggtggcgacctacgggcatattcgtgatctacccagcaaaaat
ggctcggtggatacggagcacggttttgctatgaaatatagcgtgcccaaggattccacc
aaacgggtggatgagttggctaaggctgtgaagggggctgagcaagtattgctggcaacc
gaccctgaccgcgagggagaggcgatctcctggcacgtctatgaggttttgaatgagaaa
aaactgctagaaaatgtgcaggttaagcgggtggtgttccatgagatcaccaaaaccgcc
attcaggacgccgttgcccacgcccgggatgtggatatggatatggtgaacgcccaacag
gcacggcgggcgttggactatttggtgggttttaatctgagtccgcttttgtggcgcaag
gtacgccggggtctctcggcgggtcgggtacagtcggtggcgttgcgtctggtgtgcgag
cgcgaggcggagattcaagcttttgaggctcgtgaatattggagcattaccgctctggcg
gcgcaggcggcacaatccgcaccacgcccctttgaggcgcgtctggcggtggccgatggg
gagaaactctccaaattttccattggtgatgaggcctatgccaaaagattgattaaggcg
gtggagaagcgtccactgtatgtttccgaaattgagaaaaagcagagcaagcgcaatcct
gcgcccccctttatcacctcgactttacagcaggaggcctcgcgcaagctgggtttttcg
gccaaaaaaaccatgaccgtggcccaacgcctctatgaaggtatggaggtgccgacggcg
gatggcggtaaagagacggtaggccttattagctatatgcgtaccgattcggtgaacttg
gccaatgaggccattgagtcgattcgcaaacagattgagatccgttatggcaaggagtat
ctgcccaagtcaccgcgcaaatacaaatcctcggccaaaaatgcccaggaggcccacgaa
gcgattcgccccacggatgttatccgcacaccagagatgctgcgggagatcctggagaag
gatcaatttcgtctatatgagttgatctggaaacgcaccgtagcctgccaaatggcccaa
gccaaaatagataaagtggcggccaatttgtcggtggatagtcaagaccccaacgcggcc
taccgttttcgcgccaccggctcctctgtggcttttgctggctttatgaaggtctatatg
gagggcaaagatgaggtatcggcccaagaccgcgaagatgacgatgatgataatgagagc
attctgccgccgctggaggtaggacagcagcttgagcaaaagtcgctggatgcccgtcag
cactttaccgagccgccgccgcgttatacagaagccaccctggttaaagtgctggagagc
tacggtattggccgaccctccacctatgcgccgaccatgtccacgctacaggatcggggt
tatgtcaagctggatgcccgcaaattttatcccgaagatgtgggtatggtggtcaacagc
tacctgaccaaacacttctctacctatgtggattataactttaccgccaatctggaggat
cagttggatgcggtctcccggggggagaagagttgggtccctttgatggaggatttttgg
cagccctttattcagcagatcacgctcaaggatgagaccacctctaaagaggaggtaacc
accgagcagattgatgagccgtgtcccaaatgtggcgcaccgctctccatcaaactgggc
cgctttggtaagtttaaggcctgtaccggttatccagagtgcaagcataccgagccgctc
aataaggaggaggaggtctcgcgtccagagccggagcttaccgacattccctgtgataag
tgtggcaaacccatgctgattaaagaggggcgctacggcaaatattatgggtgttctggt
gcaccggagtgcaaaaataaccagccgctgaataaacccagggatacgggtgtggcctgt
ccgagctgtggtcagggcacttttttggagaagaaatccagacggggtaagatcttttac
tcctgttccaactatcccaagtgcaagcaggcgttgtgggatgagcctttggagatcccc
tgtcccaagtgtcaggctccctttgtgaccaaaaaggtgaccaaaacccggggtaccgag
catatttgcgtggcggaggggtgtgactataaagaggtggtcgaggcgcccataaaaacc
tccaagcagtaa
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