Magnetococcus marinus: Mmc1_3724
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Entry
Mmc1_3724 CDS
T00427
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mgm
Magnetococcus marinus
Brite
KEGG Orthology (KO) [BR:
mgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mgm03016
]
Mmc1_3724
Enzymes [BR:
mgm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Mmc1_3724
Transfer RNA biogenesis [BR:
mgm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mmc1_3724
Prokaryotic type
Mmc1_3724
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ABK46209
UniProt:
A0LE16
LinkDB
All DBs
Position
complement(4677553..4678512)
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AA seq
319 aa
AA seq
DB search
MGRRRRKGVVIHGWLAIHKEPGLSSSQVVERVIRTTKANKAGHGGTLDPFSEGVLPIALG
EATKTSGMVLNGDKSYRCWLKFGQETDSGDLTGVLLEEQGRVPSEAELRAVLPQFMGEIE
QVPPVFSALRVDGERAYKRARRGEEVQLASRRVRIDRLELVGFEADTAVLDVACGKGTYI
RSLGVDIARALHSRAHLVRLLRTGTMGFGLNDAVTLEQLREACSEGRLQEILYPVDRVLD
DIPALRMTGNAWYRLRQGQEVEVEDAATPAGMVRLQDPDGQFGLLGEISAQADLQGLRRI
KPTRLFHLDETPGSDPTAQ
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcagacgtcgtaaaggggtggtgattcacggttggttggcgatccacaaggag
cctggtttaagttccagtcaggttgtggagcgggtgatccgcaccaccaaggccaataag
gccggtcatgggggtactttggatcccttttctgagggggttttgcccattgctttgggg
gaggccaccaagaccagcggtatggtgctgaatggggataaaagctaccgttgctggtta
aagtttggccaggagaccgacagcggcgatctaaccggcgtgctgttggaagagcaaggg
cgggtgcctagcgaggcagagttgcgggctgtgctcccgcaatttatgggtgaaattgaa
caggttcccccggttttttcggcgcttagggtagacggtgagcgggcttataaacgggcc
agacgcggagaagaggtgcaattggcctcgcgacgtgttagaattgaccgccttgaactg
gttggatttgaagcagataccgccgttttggatgtagcgtgtgggaaaggcacctatatt
cgctcgctgggggtggacattgcccgggcgctgcatagccgggcgcatctggtgcgtcta
ctgcgtaccggtaccatgggttttggcctaaatgatgctgttacattggaacaattgcgt
gaagcctgtagtgagggtaggctacaggagattttataccctgttgaccgggtgctggac
gacatcccggctctacggatgacagggaacgcttggtaccgcctgcgccaagggcaggag
gttgaggtggaggatgcagcaaccccggcggggatggtgcgtttgcaggatcccgacggc
cagtttggcctgctgggggagatctcagcgcaagctgatctgcaaggtttgcggcggatt
aaaccgacgcggctctttcatctggacgagacaccaggcagtgacccaacggcccaatga
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