Mycoplasmoides gallisepticum NC96_1596-4-2P: HFMG96NCA_0133
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Entry
HFMG96NCA_0133 CDS
T02328
Name
(GenBank) hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mgnc
Mycoplasmoides gallisepticum NC96_1596-4-2P
Pathway
mgnc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgnc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HFMG96NCA_0133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgnc03019
]
HFMG96NCA_0133
Messenger RNA biogenesis [BR:
mgnc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HFMG96NCA_0133
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Regulator_TrmB
Lactamase_B_6
NIBRIN_BRCT_II
Motif
Other DBs
NCBI-ProteinID:
AFP77180
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Position
complement(22124..23824)
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AA seq
566 aa
AA seq
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MIKDFKDINPNKKPTKIFAFGGLEEVGKNMYGIEYDDELIIVDCGIKFSSVELLGIDGIV
PNFAYAKANQHKIKALVITHGHEDHIGGIPYLLREVSVPVIYAPLMATKLIEKKLHEHHN
LNQYKIVSYNDKSEFSTKHFKIDFYRVCHSIPDAFGVCVQTPNGNIVESGDYRFDFNAGN
EELDIHKVVEISRRGIDLFMTETTNAEIPGFSSSEKEIYDNIKNIIKNANGRVILSTFAS
NVTRISEVIEIAIQHGRKICLLGKSMDNNVSISRDVGYINLKDDDIVESRYVEQHPDNEI
MIFCTGSQGEELAALNMLASGRHPWIQLKKTDSIIMSSNPIPGNYAAVERLLNELSKEEG
ISIYENSPTLKLHASGHATMQEIQLMLSLLRPKYLFPIHGEYKMFTSLKRIAKKCGFDPE
NVALHKNGQIVYLIDRELYYTKETIDAEPLFIEGKSVSPNVKRIMNTRQVLSEEGIFAIT
VVIDKASKQIKTLPKLKSSGCFYLKESHGLMTKIAYEIKTNANEYLAKNQNYSEHELKKI
IHESCRFYIWRNKHRNPLVVSNIREI
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgattaaggattttaaagatattaatcctaataaaaagcccaccaaaatctttgctttt
ggtggacttgaagaagtaggaaaaaacatgtatggtatcgaatatgacgatgaattaatc
atagttgattgtggtatcaagttctcttctgttgaactattaggaatcgatgggatcgtt
cccaattttgcttatgcaaaagcaaaccaacacaagattaaggcattagttattacccat
ggtcatgaagaccacatcgggggaattccttatttattaagagaggttagtgttcctgta
atttatgcgccgttgatggcaactaaattaatcgagaaaaaattacatgaacaccataac
ctaaaccaatataagatcgtttcatataacgataaatctgagtttagtaccaaacacttt
aaaattgatttttatcgagtctgtcactcgatcccagatgcatttggtgtttgtgttcaa
acaccaaatggtaatatcgttgaaagtggtgattaccgttttgattttaatgctggtaat
gaagagttagatattcataaagtagttgagatcagtagacgtgggattgatctatttatg
actgaaaccacgaatgctgagattccggggttttcaagctctgaaaaagagatctacgat
aatattaaaaatattatcaagaatgctaatgggcgggtgatcttatcaacctttgcttca
aacgttaccagaataagtgaagtaatcgagatcgcaatccaacatggtcgtaagatctgt
ttattgggtaaatcgatggataataacgtttcgatctctcgagatgttgggtatattaac
cttaaagatgatgatattgttgaatctagatatgtagaacaacaccctgataatgagatc
atgatcttttgtacgggttctcaaggagaagagttggctgcacttaatatgttagcaagc
gggcgtcatccttggatccaacttaaaaagaccgattcaattatcatgtcatctaacccg
attccggggaattatgcagccgtagaacggctacttaacgaactatctaaagaagagggg
atctcgatttatgaaaattctccgacgttaaagttgcacgcttctggtcacgcaacgatg
caagagattcaactaatgttaagcttgctaagacctaaatacttattcccaatccatggg
gaatataagatgtttacttctttaaaaagaattgctaaaaagtgtggttttgacccagaa
aacgtagccctacataaaaacggtcagatcgtttatctaatcgatcgtgaactgtattac
acaaaagaaacgatcgatgctgaaccactcttcatcgaaggtaaatcagtttcacctaac
gttaaaagaattatgaacactagacaggtgttatctgaagaggggatctttgcaattact
gtcgtaattgataaagcaagcaaacagattaaaactttacctaaactaaaatctagtggt
tgtttctatctcaaagaaagtcatggtctaatgaccaagattgcttatgagattaaaact
aatgctaatgagtatttagctaaaaaccaaaactactcagagcacgaattaaagaaaatt
atccacgaaagttgccgtttctacatctggagaaacaaacaccgcaacccactagtggta
tcaaacatcagagagatctaa
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