Mycoplasmoides gallisepticum NC96_1596-4-2P: HFMG96NCA_3979
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Entry
HFMG96NCA_3979 CDS
T02328
Name
(GenBank) SrmB-like ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
mgnc
Mycoplasmoides gallisepticum NC96_1596-4-2P
Brite
KEGG Orthology (KO) [BR:
mgnc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgnc03019
]
HFMG96NCA_3979
03009 Ribosome biogenesis [BR:
mgnc03009
]
HFMG96NCA_3979
Enzymes [BR:
mgnc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HFMG96NCA_3979
Messenger RNA biogenesis [BR:
mgnc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HFMG96NCA_3979
Ribosome biogenesis [BR:
mgnc03009
]
Prokaryotic type
rRNA helicases
HFMG96NCA_3979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
PhoH
Motif
Other DBs
NCBI-ProteinID:
AFP77590
LinkDB
All DBs
Position
complement(673506..674876)
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AA seq
456 aa
AA seq
DB search
MNQIYPWKEFIAKTLKAMGIHEPTKIQKEAIPPLLKQKNLIGVAPTGTGKTLAFLLPILQ
NLDFAQNLIQAVIIVPTRELANQIKSVLANFVKTNKAIRIKSFVGSTQFDEQIISIKNNP
PHILISTPSRFNQAIDHAVNWNLKSTKYLIYDEIDMMIDQGFFSDLIKTQEYIFNANKKL
SIAAFSATLHLDAINKIKRFIKNATPINVSDSIWVNEKIKHYLIKNKSLDKLDSLHAVIK
NIDPYLCLIFVNKIKDIPPIQNWFEQNQIGFATLHGKLDKRVRKQQFDLIKNNQVKYAIV
SDLSSRGIDFKAVSHVISWNLPKDDIWYIHRSGRTARGDQEGESYVFYDPDDEAILKRLE
NKKLVFIPLKINRDLSLTRYQLVKPEHKKRVDDHLTNEIKKVLRSAPKKVQPGYKKKIKQ
QINKIKSKAKREAIEAKVKQRLISSYKKKNRKLKTE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagatatatccttgaaaagagtttattgcaaaaaccctaaaagcgatggggatt
catgaaccaacaaagattcaaaaagaagcaataccaccactacttaagcaaaaaaacctg
atcggtgttgcacctactggaacaggtaagacattggcatttttattgccaatcttacaa
aatctagattttgcccaaaatctgattcaagctgtaattatcgtgccaactagagaatta
gctaatcaaattaagagtgtcttagccaactttgtaaaaacaaacaaagcgatcagaatc
aaatcctttgttgggagcacacaatttgatgaacagattattagtattaaaaacaacccg
ccacatatcttaatctcgactccaagtcgctttaatcaagcgatcgatcacgctgttaat
tgaaacttaaaatcaactaaatacttaatctatgatgagatcgacatgatgatcgaccaa
ggtttttttagtgatctaattaaaacccaagaatatatctttaatgctaataaaaaactt
agtattgcagcatttagtgcaacattacaccttgatgcgatcaacaagattaagcgcttt
attaaaaatgccaccccgattaatgtttcagattcaatctgggtgaatgaaaagattaaa
cactatcttatcaaaaataagagtttagacaaattagattctttgcatgcagtaattaaa
aatattgatccttatctgtgtttaatctttgttaataagattaaagatattcctccaata
caaaactgatttgaacaaaaccagattggttttgctactttacacggaaaactagataaa
agagtaagaaaacaacaatttgatctgatcaaaaacaatcaagttaaatatgcgatcgtt
tctgatctttcatctcgggggattgatttcaaggcagtttcacatgttatttcatgaaac
ttacctaaagatgatatctgatatatccaccgttcaggacgaactgctagaggtgatcaa
gaaggtgaatcttatgtcttttatgatccagatgatgaagcaatcttaaaacggctagaa
aataaaaaactagtttttatcccgttaaagattaatcgtgatctatctttaaccagatat
caactagttaaacctgaacataaaaaaagggttgatgatcatctgactaacgaaatcaaa
aaagtcttaagatcagcccctaaaaaagtccaaccaggttataaaaagaagatcaaacaa
cagattaacaagatcaaatctaaagcaaagcgtgaagcgatcgaagctaaagttaaacaa
cgcttaattagttcttataagaaaaaaaatcgcaagcttaaaactgagtag
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