Mycolicibacterium goodii: AFA91_18810
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Entry
AFA91_18810 CDS
T04008
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mgo
Mycolicibacterium goodii
Pathway
mgo03030
DNA replication
mgo03430
Mismatch repair
mgo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AFA91_18810
03430 Mismatch repair
AFA91_18810
03440 Homologous recombination
AFA91_18810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgo03032
]
AFA91_18810
03400 DNA repair and recombination proteins [BR:
mgo03400
]
AFA91_18810
Enzymes [BR:
mgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AFA91_18810
DNA replication proteins [BR:
mgo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AFA91_18810
DNA repair and recombination proteins [BR:
mgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AFA91_18810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
UVR
DUF7508
Motif
Other DBs
NCBI-ProteinID:
AKS33611
UniProt:
A0A0K0X8A9
LinkDB
All DBs
Position
complement(4014216..4016093)
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AA seq
625 aa
AA seq
DB search
MSQRSTAVGAQLSLDMELQRDVSLADTTFVVVDLETTGGRAKATGPGGPCDAITEIGAVK
VRGGEVLGELATLVDPGRAIPPQIVELTGITTAMVRDAPRIEAVLPMFLEFARGAVLVAH
NAGFDVGFLRAAAERAQLNWPRPPVLCTVKLARRVLTRDEAPSVRLSELARLFGASTTPT
HRALDDARATVDVLHGLIERVGNQGVHTLADLRAYLPDTTPAQRRNRALADGLPNRPGVY
LFRGPSNEVLYVGTAVDLRRRVRQYFTGADPRARMKEMASLAIRVDHVECAHDLEAGVRE
LRLLAAHAPPYNRRSKAPKRWWWVALTDEAFPRLSAVRDPKHRKAIGPFSARSDAVETAE
LLATFTGMRTCTSRFGASGIHRCTERELSPCPAAQGARVEEYAAAARRAADLVDGADSAV
LADVLTHIEKLAADNRYEKAARVRDHAAVAIDTLWRGQRLHALASLPELVAARRDGNGGW
HFAVVRYGQLAGAGTARRGVPPMPVVDAICAAAQVVLPTGAPLGGALVEETALIARWLTD
PGVRIVRTVSQTDIGWATPIGAAGRYAQWAATARSARLAALQAESELLTEPHPTREQLFG
RTGVDGLGGTREPGLPGRKPLSVAG
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcgcagcaccgccgtcggcgcgcagctgtcgctggacatggagcttcaacga
gatgtgtccctggcggacaccacgttcgtcgtcgtcgacctcgagaccaccggcggccgc
gcgaaggccaccgggccgggcggcccgtgcgacgccatcaccgagatcggcgcggtcaag
gtccgcggcggcgaggtgctcggcgaactcgccacactcgtcgaccctggccgcgcgatc
ccgccgcagatcgtcgagttgaccggcatcaccaccgccatggtgcgcgacgcaccgcgc
atcgaggcggtgctaccgatgttcctcgagttcgcccgcggtgcggtgctggtggcgcac
aacgcggggttcgacgtcggattcctgcgtgccgcagccgaacgcgcacaactcaactgg
ccgcgcccgcccgtgctgtgcaccgtgaagctggcgcgccgggtgctcacccgcgacgag
gcgcccagcgtgcgcctctcggaactggcgcggctgttcggcgcgtcgaccaccccgacc
caccgcgccctcgacgacgcccgggccaccgtcgacgtgttgcacggcctcatcgagcgc
gtcggcaatcaaggcgtacacaccctcgccgaccttcgcgcgtacctgcccgacaccacc
ccggcgcaacggcgcaaccgcgcactggccgacggtctgccgaaccggcccggcgtctac
ctgttccgcggcccgtcgaacgaggtgctctatgtcggcaccgcggtcgatctgcgtcgc
cgggtgcggcagtacttcaccggggccgacccgcgcgcccggatgaaggaaatggcgtca
ctggccattcgcgtcgaccacgtcgagtgcgcccacgatctggaggccggggtgcgggaa
ctgcggctgctcgccgcgcacgccccgccgtacaaccgtcgctccaaggcgcccaagcgg
tggtggtgggtggcgctgaccgacgaggcgttcccccggctgtcggcggtacgggacccc
aaacaccgcaaggcaatcggaccgttctcggcccgctccgacgccgtcgagaccgccgaa
ctgctcgccacgttcaccgggatgcgcacgtgcacttcccggttcggcgcgtcgggaatc
caccgctgcacagaacgcgagctgtcgccgtgcccagccgcgcagggcgcccgcgtcgag
gagtacgccgcggccgcacggcgcgccgcggatctcgtcgacggtgcggacagcgccgtg
ctcgccgacgtgctgacgcacatcgagaagctcgcggccgacaaccgctacgagaaggcc
gcgcgggtccgcgaccacgccgcggtggcgatcgacacgttgtggcgcggtcagcgcctg
cacgccctcgcgtcgctccccgaactcgtcgccgcccgccgcgacggaaacggcggctgg
catttcgcggtggtgcgctacgggcaactcgccggcgcgggcaccgcgcgccgcggggtc
ccgcccatgcccgtggtcgacgcgatatgtgcggccgcccaggtggtgctgccgacgggc
gcaccgctgggcggggcgctcgtggaggaaaccgcgctcatcgcccgctggctcaccgac
cccggggtccgcatcgtgcgcaccgtcagccagaccgacatcgggtgggccacgccgatc
ggtgcggcgggccgctacgcgcagtgggccgcgacggcccgctcggcgcggctcgcggcg
ctgcaggccgaatcagagttgctgaccgaaccgcacccaacgcgcgagcagttgttcggc
cgcaccggagtcgatggcctcggtggcacgcgcgagcccggcctcccaggccggaagcca
ctgagcgtcgctggctag
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