KEGG   Mycolicibacterium goodii: AFA91_20860
Entry
AFA91_20860       CDS       T04008                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
mgo  Mycolicibacterium goodii
Pathway
mgo03030  DNA replication
mgo03410  Base excision repair
mgo03420  Nucleotide excision repair
mgo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mgo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AFA91_20860
   03410 Base excision repair
    AFA91_20860
   03420 Nucleotide excision repair
    AFA91_20860
   03440 Homologous recombination
    AFA91_20860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mgo03032]
    AFA91_20860
   03400 DNA repair and recombination proteins [BR:mgo03400]
    AFA91_20860
Enzymes [BR:mgo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AFA91_20860
DNA replication proteins [BR:mgo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AFA91_20860
DNA repair and recombination proteins [BR:mgo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     AFA91_20860
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AFA91_20860
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_5 NYN_YacP CNV-Replicase_N DNA_pol_lambd_f
Other DBs
NCBI-ProteinID: AKS36514
UniProt: A0A0K0XGH8
LinkDB
Position
4454852..4457590
AA seq 912 aa
MSPAKTATQKTPAKAADDTPTLMLLDGNSLAFRAFYALPAENFKTQGGLTTNAVYGFTAM
LINLLRDEQPTHVAAAFDVSRQTFRKEKYPEYKEGRSATPDEFRGQIDITKEVLGALGIT
VLAEPGFEADDIIATLATQAEQEGYRVLVVTGDRDSLQLVSDQVTVLYPRKGVSELTRFT
PEAVVEKYGLTPQQYPDFAALRGDPSDNLPGIPGVGEKTATKWIVEYGTLQGLVDNVDAV
KGKVGDALRANLSSVILNRELTDLIRDVPLAQTPDTLRMQPWNRDQIHRLFDDLEFRVLR
DRLFETLVAVEPEVEHGFDVRGRALEPGELAAWLSEHSLGSRFGLAVVGTHKAYDADATA
IAIVAADGDGRYIDTSKLTPEDEEALASWLADPGPPKALHEAKLAMHDLAGRGWALRGVT
SDTALAAYLVRPGQRSFALDDLAVRYLHRELRAETPEQQQLSLLDDSEGVDEQAVQTVIL
RACAVLDLADALDEELARIDSLSLLSRMELPVQRTLAEMEHAGIAVDIGMLEQLQSEFAD
QIRDAAEAAYAVIGKQINLGSPKQLQAVLFDELEMPKTKKTKTGYTTDADALQSLFEKTG
HPFLQHLLAHRDATRLKVTVDGLLNSVASDGRIHTTFNQTIAATGRLSSTEPNLQNIPIR
TEAGRRIRDAFVVGEGPDGPYAELMTADYSQIEMRIMAHLSRDEGLIEAFNTGEDLHSFV
ASRAFSVPIDEVTPELRRRVKAMSYGLAYGLSAYGLAQQLKISTEEAKVQMEQYFDRFGG
VRNYLRDVVDQARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIK
VAMINVDQAIKDAGLRSRILLQVHDELLFEVADGERESLEALVREYMGNAYPLDVPLEVS
VGYGRSWDAAAH
NT seq 2739 nt   +upstreamnt  +downstreamnt
gtgagccccgccaagaccgcaacccagaagacaccggccaaggccgcagacgacacgccc
accctgatgttgctcgacggcaactcactggcgttccgggcgttctacgcactgcccgcc
gagaacttcaagacccaaggcggcctgaccaccaacgcggtgtacgggttcaccgccatg
ctgatcaacctgctccgcgacgagcagcccacacacgtcgcggcggcattcgacgtgtcg
cggcagaccttccgcaaggagaagtacccggagtacaaggagggccgctcggcgacgccg
gacgagttccgcggtcagatcgacatcaccaaggaagtgctcggggcgctcggtatcacg
gtgctcgccgagccggggttcgaggccgacgacatcatcgcgacgctcgccacgcaggcc
gagcaggagggctaccgcgtgctggtggtcaccggtgaccgtgactccttgcagttggtc
agcgaccaggtaaccgtgctctatccgcgcaagggtgtcagcgagctgacccggttcacg
ccggaggccgtggtggagaaatacggtctgacaccgcagcagtacccggatttcgcggcg
ctgcgcggcgacccgagcgacaacctgcccggcatccccggcgtgggggagaagaccgcc
accaagtggatcgtcgagtacggcacgctgcaggggctcgtcgacaacgtcgacgcggtc
aagggcaaggtcggcgacgcgctgcgggccaacctgtcgagcgtcatcctcaaccgtgag
ctcaccgacctgatccgcgacgtgccgctcgcccagacaccggacacgctgcggatgcag
ccgtggaaccgcgaccagatccaccgactgttcgacgacctggagttccgggtgctgcgg
gaccggctgttcgagacgctggtcgcggtcgagcccgaggtcgagcacgggttcgacgtg
cgcggccgcgcgttggagcccggtgagctcgccgcgtggctgtccgagcacagcctgggc
agccggttcggcctggccgtcgtcggcacgcacaaggcctatgacgccgacgcgaccgcg
atcgcgatcgtcgcggccgacggggacggtcgctacatcgacacctcgaaactgacgccg
gaggacgaggaggcgctcgcgtcctggctcgccgaccccggcccgccgaaggcgctgcac
gaggccaagctcgcgatgcacgatctggccgggcgcggctgggcgctgcgtggcgtcaca
tccgacaccgcgctcgcggcgtacctggtgcgtcccgggcagcgcagcttcgccctcgac
gacctcgcggtgcggtacctgcaccgcgagctgcgcgcggaaactccggagcagcagcaa
ctttcgttgctcgacgactccgagggcgtcgacgagcaggccgtgcagaccgtgatcctg
cgggcctgcgcggtgctcgacctggccgacgcgctcgatgaggaactggcccgcatcgac
tcgctgtcgctgctcagccgcatggagctgccggtccagcggaccttggccgagatggag
cacgcgggcatcgcggtcgacatcggcatgctcgagcagctgcagagcgagttcgccgat
cagatccgcgacgcggccgaggccgcctacgccgtgatcggcaagcagatcaacctcggc
tcaccgaagcagctacaggccgtgctgttcgacgagctcgagatgccgaagaccaagaag
accaagaccggctacaccaccgacgccgacgcgctgcagtcgctgttcgagaagaccggc
cacccgttcctgcagcatctgctggcccaccgggacgccacgcggctcaaggtgaccgtc
gacggcctgctcaactcggtggcgtcggatgggcgcatccacaccacgttcaaccagacg
atcgccgcgacgggtcggctgtcgtcgaccgagcccaacctgcagaacatcccgatccgc
accgaggcgggccgccggatccgggacgcgttcgtggtgggcgagggccccgatggacct
tatgccgagctcatgaccgccgattacagccagatcgagatgcggatcatggcgcatctg
tcccgcgacgaaggcctcatcgaggcgttcaacaccggtgaggatctgcactccttcgtc
gcgtcgcgcgcattctcggtgccgatcgacgaggtgaccccggaactgcgccgccgggtc
aaggcgatgtcctacggcctggcctacggtttgagcgcctacgggctggcgcagcagctc
aagatctccaccgaagaggcgaaggtgcagatggagcagtacttcgaccgattcggcggg
gtgcgcaactatctgcgggacgtggtcgatcaggcgcgcaaggacggttacacatcgacc
gtgctgggccgcaggcggtatctgcccgaactcgacagcagcaaccgccaggtccgcgag
gccgccgaacgtgcggcgctcaacgccccgatccagggcagcgccgccgacatcatcaag
gtcgccatgatcaacgtcgaccaggccatcaaggacgccggcctgcggtcgcggattctg
ctgcaggtccacgacgagttgctgttcgaggtcgccgacggtgaacgcgaaagcctcgag
gcgctggtccgcgagtacatgggcaacgcctatccgctcgatgtgccgctggaggtgtcg
gtgggctacggccgcagctgggacgccgcggcgcactga

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