Mycolicibacterium goodii: AFA91_27395
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Entry
AFA91_27395 CDS
T04008
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mgo
Mycolicibacterium goodii
Pathway
mgo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFA91_27395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgo03400
]
AFA91_27395
Enzymes [BR:
mgo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AFA91_27395
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AFA91_27395
DNA repair and recombination proteins [BR:
mgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AFA91_27395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
TackOD1
Motif
Other DBs
NCBI-ProteinID:
AKS35004
UniProt:
A0A0K0XC57
LinkDB
All DBs
Position
complement(5870338..5871225)
Genome browser
AA seq
295 aa
AA seq
DB search
MPELPEVEVVRRGLAEHVTGKAITAVRVHHPRAVRRHEAGPADLTARLLDARITGTGRRG
KYLWLTLDDSAALVVHLGMSGQMLLGPIRDTRHLRIAAVLDDGTALSFVDQRTFGGWQLT
EMVTVDGTDVPEPVAHIARDPLDPLFDRDRVVTVLRGKHSEIKRQLLDQTVVSGVGNIYA
DEALWRTKINGARIAAALPRRRLAELLDAAAEVMTDALGQGGTSFDSLYVNVNGESGYFD
RSLDAYGREGEPCRRCGAIMRREKFMNRSSFYCPRCQPRPRAPRPRPGPDRLGIS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcttcccgaggtcgaggtggtccggcgcgggctggccgagcacgtgaccggc
aaggccatcaccgcggtgcgcgtgcaccatccgcgcgcggtgcgccgtcacgaggcgggc
ccggcggatctgaccgcgcgcctgctggacgcgcggatcaccgggaccgggcggcgggga
aagtacctgtggctcaccctcgatgactccgcggcgctcgtggtccacctcggcatgagc
gggcagatgctgctcggcccgatccgcgacacgcggcacctgcgcatcgcggcggtgctc
gacgacggcaccgcgctgagtttcgtcgaccagcgcacgttcggcgggtggcagctgacc
gagatggtcaccgtcgacggcaccgacgtgcccgagccggtggcgcacatcgcgcgtgac
ccgctcgacccgctgttcgaccgcgaccgggtcgtcacggtgttgcggggcaagcactcc
gagatcaagcggcagttgctcgatcagaccgtggtgtcgggtgtcggcaacatctacgcc
gacgaggccctgtggcgcaccaagatcaacggcgcgcggatcgccgcggccctgccgcgc
cgtcgcctcgccgagctgctcgacgcggccgccgaggtgatgacggatgcgctggggcag
ggcggcacgtcgttcgactcgctgtatgtcaacgtcaacggcgaatccgggtacttcgac
cggtcattggacgcctacggccgcgaaggtgagccgtgccggcggtgcggagcgatcatg
cgccgcgagaagttcatgaaccggtcgtcgttctactgcccgcgatgccagccgcggcca
cgggcgccgcgccctcgaccaggtcccgatcgactcgggatcagttga
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