Mycolicibacterium goodii: AFA91_30045
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Entry
AFA91_30045 CDS
T04008
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mgo
Mycolicibacterium goodii
Brite
KEGG Orthology (KO) [BR:
mgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgo03032
]
AFA91_30045
03400 DNA repair and recombination proteins [BR:
mgo03400
]
AFA91_30045
Enzymes [BR:
mgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AFA91_30045
DNA replication proteins [BR:
mgo03032
]
Prokaryotic type
DNA Topoisomerases
AFA91_30045
DNA repair and recombination proteins [BR:
mgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AFA91_30045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AKS35444
UniProt:
A0A0K0XDF9
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All DBs
Position
6428831..6429847
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AA seq
338 aa
AA seq
DB search
MRLRRSVVDGPGIRRIRRGRGFSYQKSNGQKVTDRAALQRIEDLVIPPAWKAVWICPYPS
GHIQAVGTDVAGRRQYLYHPQWQQERSEEKFDRVLEMSAALQNWRAALAGDLRRRGLRRD
RVLALGLRLLDLGYFRAGGEKYAEENNSFGIATLQCEHVSVGTDGVEFDYPAKSGVRRTL
RVEDPDVVRAVRALQRQRGTGERFLAFKDTSDWVEVRAEDLNLRFKEMVGADYTVKDLRT
WHGTVLAAEAFVDADPPVDPKVIKRVESAVMREVSDGLGNTPAVARSAYVDPRVVQAYRN
GVTIESVVRRAARIRSADERQAVLDRATARLIRKMARG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcggttgcgtcgaagcgtggtcgacgggcccgggatcagacggatccgcaggggccgc
ggcttcagctatcagaagtcgaacgggcagaaggtaactgaccgggccgcgttgcaacgc
atcgaggacctggtcatcccgccggcctggaaggcggtgtggatctgcccctaccccagc
ggccacatccaggcggtcggcaccgacgtcgcgggccgaaggcagtacctgtaccacccg
cagtggcagcaggaacgcagcgaggagaagttcgaccgggtactggaaatgtctgcggca
cttcagaattggcgagcagccctggccggcgatctgcgcaggcgggggctgcgccgcgac
cgggtgctcgcgctcggactgcgactgctcgacctcggatacttccgtgcgggcggtgag
aagtacgccgaggagaacaattcgttcggcatcgcgacgctgcagtgcgaacacgtcagt
gtgggcaccgacggcgtggagttcgactatccggcgaagagcggggtgcggcgcaccctg
cgtgtcgaggaccccgatgtggtgcgtgccgtgcgggcgctgcagcgacaacgcgggacg
ggcgaacggttcctggcgttcaaggacacgagcgactgggtcgaggtgcgcgccgaggac
ctcaatctgcggttcaaggagatggtcggggcggactacacggtcaaggatctgcgtacc
tggcacggcaccgtgctcgccgcagaggcgttcgtcgacgccgacccgccggtcgacccg
aaggtgatcaagcgggtggaatcggcggtgatgcgcgaggtctccgacggactggggaac
actccggcggttgcgcgcagcgcctacgtcgacccccgtgtggtgcaggcataccgcaac
ggggtgacgatcgagtccgtggtgcggcgcgcggcgcgaatcaggtcggccgatgaacgc
caggcggtcctggatcgggcgacggcccggttgatcaggaagatggcccgcggctga
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