KEGG   Mycolicibacterium goodii: AFA91_30230
Entry
AFA91_30230       CDS       T04008                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mgo  Mycolicibacterium goodii
Brite
KEGG Orthology (KO) [BR:mgo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mgo03400]
    AFA91_30230
Enzymes [BR:mgo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AFA91_30230
    5.6.2.6  RNA 3'-5' helicase
     AFA91_30230
DNA repair and recombination proteins [BR:mgo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    AFA91_30230
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr WH4_Lhr WH2_Lhr DEAD Helicase_C ResIII PhoH AAA_25 DUF6406 AAA_22
Other DBs
NCBI-ProteinID: AKS35479
UniProt: A0A0K0XDI5
LinkDB
Position
6460797..6465323
AA seq 1508 aa
MTTTGADPLVRFGALTREWFTTAFAAPTPAQADAWSAISEGNNTLVIAPTGSGKTLAAFL
WAIDRLAQESGEPPRTGTQVLYVSPLKALAVDVERNLRTPLTGITRVAERNGLPAPKITV
GVRSGDTPPNQRRAMIADPPDILITTPESLFLMLTSAARETLTSVRTVIVDEVHAVAATK
RGAHLALSLERLDQLLEAPAQRIGLSATVRPPEEVARFLSGQAPTTIVCPPAAKTFDLSV
QVPVPDMANLENNSIWPDVEEQIVDLVEAHRSSIVFANSRRLAERLTSRLNEIHAERSGI
ELPAGPNPQVGGGAPAHLMGSGQANGAPPLLARAHHGSVSKEQRAQVEDDLKSGRLRAVV
ATSSLELGIDMGAVDLVIQVEAPPSVASGLQRVGRAGHQVGEISQGVLFPKHRTDLIGCA
VTVQRMHSGDIETLRVPANPLDVLAQHTVAVAALEPVDADAWFDSVRRSAPFATLPRSAF
EATLDLLSGKYPSTEFAELRPRLVYDRDTGTLTARPGAQRLAVTSGGAIPDRGMFTVYLA
SESEKPSRVGELDEEMVYESRPGDVISLGATSWRITEITHDRVLVIPAPGQPARLPFWRG
DSVGRPAELGAAVGAFTGELASLDRKAFDKRCQDMGFAGYATENLHQLLREQREATGVVP
SDTTFVVERFRDELGDWRVILHSPYGLRVHGPLALAVGRRLRERYGIDEKPTASDDGIIV
RLPDSGDTPPGADLFVFDADEIEPIVTAEVGGSALFASRFRECAARALLLPRRHPGKRSP
LWHQRQRAAQLLDIARKYPDFPIVLEAVRECLQDVYDVPALIELMHKVAQRRLRVVEVET
ATPSPFAVSLLFGYVGAFMYEGDSPLAERRAAALALDTVLLSELLGRVELRELLDPAVVA
STSAQLQHLTPERAARDAEGVADLLRLLGPLTEAEIAQRCTADNIGGWLDGLHAAKRALP
VTYAGQTWWAAVEDIGLLRDGIGVPVPVGVPAAFTGSASDPLGDLIGRYARTRGPFSTEQ
TAARFGLGVRVASDVLSRMAVDGRLVRGEFVADLAGEQWCDAQVLKILRRRSLAALRAQV
EPVSTDAYARFLPAWQHVGSTGTTGVDGLATVIEQLAGVPVPASAVESLIFPQRVRDYQP
AMLDELLASGEVMWSGAGQIGGGDGWIAFHLADSAPLTLTPGAEIEFTDTHRAIMETLGH
GGAYFFRQLTDGTVEGTAGQQLKQALWDLIWAGWVTGDTFAPVRAVLSGPRRSGTPAHRQ
RHRPPRLSRYSVAHAQTRSTDPTVSGRWSAVPGAEPDSTVRAHFQAELLLGRHGVLTKGA
VGAEGVPGRFATLYKVLSAFEDAGRCQRGYFVESLGGAQFAVASTVDRLRSYLDNVDPER
PEYHAVVLAATDPANPYGAALAWPTDSEAHRPGRKAGALVVLVDGRLVWFLERGGRSLLS
FGVDPDAQRAAAGALTDLVGAGRIPSLLVERINGVAVLDPDVDAERAVVQDALLGAGLSR
TPRGLRLR
NT seq 4527 nt   +upstreamnt  +downstreamnt
atgaccaccactggggctgatccgctggtccggttcggcgcgctgacccgggagtggttc
acgactgcgttcgccgcgccgacaccggcgcaggccgatgcctggtcggcgatctccgag
ggcaacaacaccctggtcatcgccccgaccgggtcgggcaagacacttgccgcgttcctg
tgggcgatcgaccggctggcgcaggagtcgggcgagccgccccggaccggcacgcaggtg
ctctacgtctccccgctcaaggcactcgcggtcgacgtcgaacgcaacctgcgcaccccg
ctgaccggtatcacgcgggtcgccgaacgcaacggactgcccgccccgaagatcacggtg
ggtgtgcgctccggggacaccccaccgaatcagcgccgcgcgatgatcgccgaccccccg
gacatcctgatcacgacgcccgagtcgctgttcctcatgttgacctcggccgcccgcgag
acgctgacctcggtgcgcacggtcatcgtcgacgaggtgcacgcggtggccgcgaccaag
cgcggtgcacacctggcgctgtcgctggaacgcctcgatcagttgctcgaggcccccgcg
caacgcatcggcctgtcggccacggttcgtccgcccgaggaggtcgcccggttcctgtcc
gggcaggcccccaccacgatcgtgtgcccgcccgccgccaagaccttcgacctgtcggtc
caggtgccggtgcccgacatggccaacctggagaacaactcgatctggcccgatgtcgag
gaacagatcgtcgacctcgtcgaggcccaccggtcgtcgatcgtgttcgccaactcgcgg
cggctggccgagcggctcacctcccggctcaacgagatccacgccgagcgcagcggcatc
gaactgccggccgggcccaatccgcaggtcggcggcggcgccccggcccacctgatgggc
agcggccaggccaacggagccccaccgctgctggcccgggcccatcacggctcggtcagc
aaggagcagcgcgcccaggtcgaagacgacctcaagagcggcaggctgcgggccgtcgtc
gcgacgtcgagcctggaactgggcatcgacatgggcgcggtcgatctggtgatccaggtc
gaggcgcccccgtcggtggcgagcggtctgcaacgcgtcggacgcgccggtcaccaggtg
ggcgagatctcgcagggggtgctgttccccaagcaccgtaccgacctgatcggatgcgcg
gtgaccgtgcagcgcatgcacagcggcgacatcgaaaccctgcgggtgcccgccaacccg
ctcgacgtgctcgcccagcacaccgtcgcggtcgcggccctggagccggtcgacgccgac
gcgtggttcgactcggtgcgccgcagcgcaccgttcgcgacgctgccgcgcagcgcattc
gaggccaccctcgacctgctgtcgggcaagtacccctcgaccgagttcgccgaactgcgg
ccccgcctggtctacgaccgtgacaccggcacactcaccgcgcggcccggcgcgcagcgg
ctcgcggtgacctcgggcggcgcgatccccgaccgcggcatgttcaccgtctacctggcg
tcggagagcgaaaagccctcccgggtgggcgaactcgacgaggagatggtctacgaatcg
cggccgggcgacgtgatctcgctgggcgccacgagttggcgcatcaccgagatcacgcac
gaccgcgtgctggtcatccccgcgccagggcaacccgcacgtctgccgttctggcgcggc
gacagcgtgggccgcccggccgaactgggtgcggcggtcggcgcgttcaccggagaactc
gcgagcctggaccgcaaggcgttcgacaagcgttgccaggacatgggtttcgccggctac
gcgaccgagaacctacaccagttgctgcgtgaacaacgcgaggccaccggcgtggtaccg
agcgacaccacgttcgtcgtcgaacgcttccgcgacgaactcggcgactggcgggtgatc
ctgcactcgccgtacgggctgcgcgtgcacggcccgctcgcgctggccgtcggccgacgg
ctgcgcgaacggtacggcatcgacgagaagccgacggcatccgacgacggcatcatcgtc
cggctccccgacagcggtgacaccccgcccggcgcagatcttttcgtgttcgacgccgac
gagatcgaaccgatcgtcaccgccgaggtcggcgggtcggcgctgttcgcgtcccggttc
cgcgagtgtgcggcccgcgcgctgctgctgccccgccggcatccgggcaagcgttccccg
ctgtggcaccagcggcagcgggccgcgcaactgctcgacatcgcgcgcaagtacccggac
ttcccgatcgtgctggaagccgtgcgggaatgtctgcaggacgtctacgacgtgcccgcg
ctcatcgaactcatgcacaaggtcgcccagcggcgcctgcgcgtggtcgaggtggagacc
gcgacgccgtcgccgttcgcggtgtcgctgctgttcggctacgtcggtgcgttcatgtac
gaaggtgacagcccgctcgccgagcggcgcgcggcggcgctggcgctggacaccgtgctg
ctgtccgaactgctcggtcgcgtcgagctgcgtgagctgctcgatccggccgtcgtcgcg
tcgacctcggcacagctgcaacatctgacgcccgagcgggccgcgcgcgacgccgagggt
gtcgcggatctgctgcgcctgctgggcccgctcaccgaggccgagatcgcgcaacgctgc
accgccgacaacatcggcggctggctcgacgggttgcacgccgcgaaacgggcgctgccg
gtgacctacgccggccagacctggtgggcggccgtcgaggacatcgggctgctgcgcgac
ggcatcggcgtaccggtcccggtgggcgtgcccgccgcgttcaccggatcggcctccgat
ccgctcggtgatctgatcggccgctacgcgcgcacccgcggtccgttcagcaccgagcag
accgccgcccggttcggcctcggtgtccgggtcgcgtcggatgtgttgagccgcatggcc
gtcgacgggcggttggtccgcggcgagttcgtcgccgacctcgccggtgagcagtggtgc
gacgcccaggtgctcaagatcctgcggcgccggtcgctggcggcgctgcgcgcgcaggtc
gaaccggtcagcaccgacgcctacgcacggttccttcccgcctggcagcatgtcgggtcg
accggcaccacgggcgtcgacgggctcgccaccgtgatcgaacagcttgccggcgtgccg
gttccggcttcggccgtggaatcgctgatcttcccgcaacgcgtccgcgactatcagccc
gcgatgctcgacgaactgctggcctctggcgaggtcatgtggtcgggggcaggccagatc
ggtggcggcgacgggtggatcgcgttccacctcgccgactccgcgccgctgaccctgaca
ccgggtgccgagatcgagttcaccgacacccatcgcgcgatcatggagaccctcggccac
ggcggcgcgtacttcttccgccaactcaccgacgggaccgtcgagggtaccgcgggtcag
caactcaaacaggcgttgtgggatctgatctgggccggctgggtcaccggcgacaccttc
gcaccggtgcgtgccgtgctgtcggggccgcgacggtccggcacccccgcgcaccggcaa
cggcaccgcccgccgcggttgagccgctacagcgtcgcccacgcccagacccgcagcacc
gacccgaccgtctcgggccgctggtcggcggtgcctggcgccgaacccgattcgacggtg
cgggcccacttccaggccgagttgctgctgggtcgccacggtgtgctcaccaagggcgcg
gtgggtgccgaaggggtgccgggaaggttcgcgacgctctacaaggtgctcagcgcgttc
gaggacgccggccggtgtcaacgcggctatttcgtcgaatcactgggcggcgcccagttc
gcggtcgcctcgacggtcgaccgtctgcgctcctatctggacaacgtcgatcccgagcgg
cccgagtaccacgccgtggtgctcgcggcgacggatccggccaacccgtacggcgccgcg
cttgcctggccgacggattccgaggcacaccggccgggccgcaaggccggtgccctggtg
gtgctggtcgatgggcgactcgtgtggttcctcgaacgcggcggccgctcgctgctgagc
ttcggtgtcgatccggacgcgcagcgggccgccgccggggcgctgaccgatctggtgggc
gccggccggatcccgtcgctgctcgtcgaacggatcaacggggtggccgtgctcgacccc
gatgtggacgccgagcgtgcggtggtgcaggacgccctgctcggtgctgggctctcgcgg
accccgcgggggctgaggctgcgctga

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