Mycolicibacterium goodii: AFA91_32050
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Entry
AFA91_32050 CDS
T04008
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mgo
Mycolicibacterium goodii
Pathway
mgo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mgo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AFA91_32050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgo03021
]
AFA91_32050
03400 DNA repair and recombination proteins [BR:
mgo03400
]
AFA91_32050
Enzymes [BR:
mgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AFA91_32050
Transcription machinery [BR:
mgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AFA91_32050
DNA repair and recombination proteins [BR:
mgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AFA91_32050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AKS35787
UniProt:
A0A0K0XEK0
LinkDB
All DBs
Position
complement(6838819..6842772)
Genome browser
AA seq
1317 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRNWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVDDEMRHNELSTLEAEMAVERKAVEDQRDADLEARAQKLEAD
LAELEAEGAKSDVRRKVRDGGEREMRQLRDRAQRELDRLDEIWNTFTKLAPKQLIVDEVL
YRELQDRYGEYFTGAMGAESIKKLIENFDIDAEAESLREVIRSGKGQKKLRALKRLKVVA
AFQQSGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGKPLAMPRLDMVTGLYYLTTLVEGATGEYQ
PATKDAPEQGVYSSPAEAIMALDRGALSVRAKIKVRLTELRPPADIEAELFQNGWKPGDA
WTAETTLGRVMFNELLPKSYPFVNEQMHKKVQARIINDLAERFPMIVVAQTVDKLKDAGF
YWATRSGVTVSMADVLVPPQKQEILERHEAEADAIERKYQRGALNHTERNESLVKIWQDA
TEEVGKALEEFYPADNPIITIVKSGATGNLTQTRTLAGMKGLVTNPKGEFIPRPIKSSFR
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCETERGINVTL
AERGHDGTLIRDAHVETSAFARTLATDAVDADGNVIIERGHDLGDPAIDALLAAGITQVK
VRSVLTCTSATGVCAMCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVT
GGADIVGGLPRVQELFEARVPRNKAPIADVAGRVRLEESDKFFKITIVPDDGGEEVVYDK
LSKRQRLRVITHEDGTEGVLSDGDHVEVGDQLMEGAADPHEVLRVQGPREVQIHLVKEVQ
EVYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGSTEFLPGSLTERAEFEAENRRVVAEGGE
PAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLNGLKENVIIGKLIP
AGTGISRYRNIQVQPTEEARAAAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDYR
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgaactccgcatcggtctggcgaccgcggacgacatc
cgcaactggtcttatggcgaggtcaagaagcccgagaccatcaactaccgcacgctgaag
ccggaaaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgcgtccggttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgcgccaaggtgcgtcgtgagcggatgggccacatcgagctggccgcgccc
gtcacgcacatctggtacttcaagggcgtcccgtcgcgcctcggctacctgctggacctg
gccccgaaggatctcgagaagatcatctacttcgcggcctacgtgatcacctcggtcgac
gacgagatgcggcacaacgagctgtccaccctcgaagccgagatggccgtcgagcgcaag
gccgtcgaggatcagcgcgacgccgacctggaggcccgcgcccagaagctcgaggccgac
ctggccgagctggaggccgagggtgccaagtccgacgtgcgccgcaaggtgcgcgacggc
ggcgagcgcgagatgcgccagctccgcgaccgggcccagcgtgagctggaccggctcgac
gagatctggaacaccttcaccaagctggcgcccaagcagctcatcgtcgacgaggtgctc
taccgcgagctgcaggaccgctacggcgagtacttcaccggcgccatgggtgcggagtcg
atcaagaagctcatcgagaacttcgacatcgacgccgaggccgagtcgctgcgtgaggtc
atccgcagcggcaaggggcagaagaagctgcgtgccctcaagcgcctgaaggtcgtcgcg
gccttccagcagtcgggcaactcgcccatgggcatggtgctcgacgccgttccggtgatc
ccgccggagctgcgcccgatggtgcagctcgacggtggccgcttcgcgacgtccgacctc
aacgacctgtaccgccgcgtgatcaaccgcaacaaccggttgaagcgactgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcgcatgctgcaggagtcggtggacgcg
ctgttcgacaacggtcgccgcggccgcccggtcaccgggccgggcaaccgtccgctcaag
tcgctgtcggatctgctcaagggcaagcagggccggttccgtcagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggtctgccgaagctgatggctctcgagctgttcaagccgttcgtgatgaagcgtctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtcgagcgtcagcgt
ccgcaggtgtgggacgtgctcgaagaggtcatcgccgagcacccggtgctgctcaaccgt
gcacccacgctgcaccgtctgggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagctgcacccgctggtgtgtgaggccttcaacgccgacttcgacggtgaccag
atggccgtgcaccttccgctgagcgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgtcgccggcgtcgggcaagccgctggccatgccgcgtctggac
atggtgaccggtctgtactacctgaccacgctcgtcgagggtgcgacgggcgagtaccag
cccgccaccaaggacgctcccgagcagggcgtgtacagcagcccggccgaggcgatcatg
gcgctcgaccgcggtgcgctgagcgtgcgcgccaagatcaaggtgcggctgaccgagctg
cgtccgcctgccgacatcgaggcggaactgttccagaacggctggaagccgggcgatgcg
tggaccgcggagaccacgctgggccgcgtcatgttcaacgagctgctgccgaagagctat
ccgttcgtcaacgagcagatgcacaagaaggtccaggcccggatcatcaacgatctggcc
gagcgcttcccgatgatcgtggtggcgcagaccgtcgacaagctcaaggacgccggcttc
tactgggccacccgttcgggtgtcaccgtgtcgatggcagacgtcctggtgccgccgcag
aagcaggagatcctggagcggcacgaggccgaggccgacgcgatcgagcgcaagtaccag
cgcggcgcgctgaaccacaccgagcgcaacgagtcgctggtcaagatctggcaggacgcc
accgaagaggtcggtaaggcgctggaggagttctaccccgcggacaacccgatcatcacg
atcgtgaagtcgggcgccacgggtaacctcacccagacgcgcaccctggcaggcatgaag
ggtctggtgaccaacccgaagggtgagttcatcccgcgcccgatcaagtcctcgttccgt
gagggcctgacggtgctggagtacttcatcaacacccacggtgcccgtaagggtctggcc
gacaccgctcttcgtaccgccgactcgggttacctgacccgtcgtctggtggacgtgtcg
caggacgtcatcgtccgcgagcacgactgcgagaccgaacgcggcatcaatgtcacgctg
gccgagcgcggccacgacggcacgctcatccgcgatgcgcacgtcgagacctcggcgttc
gcccgcaccctggccaccgatgcggtcgatgcggacggcaacgtcatcatcgagcgcggc
catgacctgggcgacccggccatcgatgcgctgctggcggccggcatcacgcaggtgaag
gtccgttccgtgctgacctgcacctcggccaccggtgtgtgcgccatgtgctacggccgc
tcgatggcgaccggcaagctcgtcgacatcggcgaggccgtcggtatcgtcgccgcgcag
tcgatcggtgagcccggtacgcagctgaccatgcgtaccttccaccagggtggtgtcacc
ggtggcgccgacatcgtcggtggtctgccccgtgtgcaggagctgttcgaggctcgcgtg
ccgcggaacaaggcgcccatcgccgacgtcgcgggccgcgtgcggctggaggagagcgac
aagttcttcaagatcaccatcgttcccgacgatggcggcgaagaggttgtgtacgacaag
ctctccaagcgtcagcgtctgcgcgtcatcacccacgaggacggcaccgagggtgtgctc
tccgatggtgaccacgtcgaggtcggcgaccagctgatggaaggcgccgccgatccgcac
gaggtgctgcgtgtgcagggcccgcgcgaggtgcagatccacctcgtcaaggaggtccag
gaggtctaccgggcccagggcgtgtcgatccacgacaagcacatcgaggtcatcgtccgg
cagatgctgcgtcgcgtcacgatcatcgattcgggctcgacggagttcctgcccggctcg
ctgaccgagcgtgccgagttcgaggcggagaaccgccgggtggtcgccgagggtggcgag
cccgcggcgggtcgtccggtgctgatgggtatcaccaaggcatcgctggccacggattcg
tggctgtcggcggcgtcgttccaggagaccactcgcgtgctgaccgatgcggcgatcaac
tgccgcagcgacaagctgaacggtctgaaggagaacgtgatcatcggcaagctgatcccg
gccggaaccggtatcagccgttaccgcaacatccaggtgcagccgaccgaagaggcccgt
gccgctgcgtacacgatcccgtcctacgaggatcagtactacagcccggacttcggccag
gccaccggtgccgcggtgccgctggacgactacggctactcggattaccgctaa
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